Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Brca1P48754 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.85■□□□□ 0.13
Brca1P48754 Gm38000-201ENSMUST00000192390 1215 ntBASIC15.84■□□□□ 0.13
Brca1P48754 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.84■□□□□ 0.13
Brca1P48754 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Brca1P48754 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Brca1P48754 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Brca1P48754 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Brca1P48754 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Brca1P48754 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Brca1P48754 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Brca1P48754 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.84■□□□□ 0.13
Brca1P48754 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Brca1P48754 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Brca1P48754 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Brca1P48754 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Brca1P48754 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC15.84■□□□□ 0.13
Brca1P48754 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Brca1P48754 Gm29705-201ENSMUST00000212598 474 ntBASIC15.84■□□□□ 0.13
Brca1P48754 Gm45880-201ENSMUST00000213041 853 ntBASIC15.84■□□□□ 0.13
Brca1P48754 Gm9176-201ENSMUST00000219955 1120 ntBASIC15.84■□□□□ 0.13
Brca1P48754 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Brca1P48754 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.84■□□□□ 0.13
Brca1P48754 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.84■□□□□ 0.13
Brca1P48754 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Brca1P48754 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Brca1P48754 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Brca1P48754 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.83■□□□□ 0.13
Brca1P48754 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.13
Brca1P48754 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Brca1P48754 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Brca1P48754 Gm8213-201ENSMUST00000118191 441 ntBASIC15.83■□□□□ 0.12
Brca1P48754 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Brca1P48754 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Brca1P48754 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Brca1P48754 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Brca1P48754 Gm38223-201ENSMUST00000194484 695 ntBASIC15.83■□□□□ 0.12
Brca1P48754 Gm43818-201ENSMUST00000200605 466 ntBASIC15.83■□□□□ 0.12
Brca1P48754 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC15.83■□□□□ 0.12
Brca1P48754 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.83■□□□□ 0.12
Brca1P48754 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Brca1P48754 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Brca1P48754 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Brca1P48754 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Brca1P48754 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Brca1P48754 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC15.82■□□□□ 0.12
Brca1P48754 Gm15770-201ENSMUST00000117498 584 ntBASIC15.82■□□□□ 0.12
Brca1P48754 Gm13342-201ENSMUST00000121055 207 ntBASIC15.82■□□□□ 0.12
Brca1P48754 Gm12176-201ENSMUST00000121420 875 ntBASIC15.82■□□□□ 0.12
Brca1P48754 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Brca1P48754 Gm27682-201ENSMUST00000183930 110 ntBASIC15.82■□□□□ 0.12
Brca1P48754 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC15.82■□□□□ 0.12
Brca1P48754 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Brca1P48754 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Brca1P48754 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Brca1P48754 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Brca1P48754 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.82■□□□□ 0.12
Brca1P48754 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Brca1P48754 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Brca1P48754 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Brca1P48754 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Brca1P48754 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Brca1P48754 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Brca1P48754 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Brca1P48754 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.82■□□□□ 0.12
Brca1P48754 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Brca1P48754 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Brca1P48754 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Brca1P48754 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Brca1P48754 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Brca1P48754 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC15.82■□□□□ 0.12
Brca1P48754 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Brca1P48754 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC15.82■□□□□ 0.12
Brca1P48754 Olfr284-202ENSMUST00000206647 966 ntBASIC15.82■□□□□ 0.12
Brca1P48754 Gm17823-201ENSMUST00000217830 1006 ntBASIC15.82■□□□□ 0.12
Brca1P48754 AC155637.1-201ENSMUST00000218560 636 ntBASIC15.82■□□□□ 0.12
Brca1P48754 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.82■□□□□ 0.12
Brca1P48754 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Brca1P48754 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Brca1P48754 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Brca1P48754 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Brca1P48754 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Brca1P48754 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Brca1P48754 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.82■□□□□ 0.12
Brca1P48754 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Brca1P48754 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Brca1P48754 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Brca1P48754 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Brca1P48754 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Brca1P48754 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Brca1P48754 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Brca1P48754 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Brca1P48754 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Brca1P48754 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC15.81■□□□□ 0.12
Brca1P48754 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Brca1P48754 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.81■□□□□ 0.12
Brca1P48754 AC132317.1-201ENSMUST00000227227 962 ntBASIC15.81■□□□□ 0.12
Brca1P48754 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Brca1P48754 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Brca1P48754 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms