Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.98□□□□□ -0.33
Rfx3P48381 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx3P48381 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx3P48381 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.98□□□□□ -0.33
Rfx3P48381 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rfx3P48381 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx3P48381 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx3P48381 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.98□□□□□ -0.33
Rfx3P48381 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx3P48381 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx3P48381 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx3P48381 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx3P48381 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx3P48381 Gm14140-201ENSMUST00000119999 995 ntBASIC12.98□□□□□ -0.33
Rfx3P48381 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx3P48381 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.98□□□□□ -0.33
Rfx3P48381 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx3P48381 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx3P48381 Gm18206-201ENSMUST00000207027 926 ntBASIC12.98□□□□□ -0.33
Rfx3P48381 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Rfx3P48381 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx3P48381 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
Rfx3P48381 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx3P48381 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx3P48381 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx3P48381 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx3P48381 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx3P48381 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx3P48381 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx3P48381 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rfx3P48381 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rfx3P48381 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rfx3P48381 Gm13597-201ENSMUST00000121239 375 ntBASIC12.97□□□□□ -0.33
Rfx3P48381 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.97□□□□□ -0.33
Rfx3P48381 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.97□□□□□ -0.33
Rfx3P48381 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.97□□□□□ -0.33
Rfx3P48381 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.97□□□□□ -0.33
Rfx3P48381 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 Psmb5-202ENSMUST00000227257 622 ntBASIC12.97□□□□□ -0.33
Rfx3P48381 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.97□□□□□ -0.33
Rfx3P48381 Gm10154-201ENSMUST00000084445 354 ntBASIC12.97□□□□□ -0.33
Rfx3P48381 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.97□□□□□ -0.33
Rfx3P48381 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rfx3P48381 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.97□□□□□ -0.33
Rfx3P48381 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx3P48381 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx3P48381 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Rfx3P48381 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx3P48381 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx3P48381 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx3P48381 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx3P48381 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx3P48381 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx3P48381 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx3P48381 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Rfx3P48381 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.96□□□□□ -0.33
Rfx3P48381 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Rfx3P48381 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx3P48381 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.96□□□□□ -0.33
Rfx3P48381 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx3P48381 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Rfx3P48381 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx3P48381 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx3P48381 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx3P48381 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx3P48381 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.96□□□□□ -0.33
Rfx3P48381 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx3P48381 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx3P48381 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms