Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-2P42586 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Nkx2-2P42586 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-2P42586 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-2P42586 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-2P42586 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-2P42586 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-2P42586 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-2P42586 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-2P42586 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.19□□□□□ -0.3
Nkx2-2P42586 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-2P42586 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.19□□□□□ -0.3
Nkx2-2P42586 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.19□□□□□ -0.3
Nkx2-2P42586 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-2P42586 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-2P42586 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nkx2-2P42586 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-2P42586 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-2P42586 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-2P42586 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.18□□□□□ -0.3
Nkx2-2P42586 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-2P42586 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-2P42586 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-2P42586 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Nkx2-2P42586 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-2P42586 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.18□□□□□ -0.3
Nkx2-2P42586 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-2P42586 Gm6222-201ENSMUST00000120787 396 ntBASIC13.18□□□□□ -0.3
Nkx2-2P42586 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-2P42586 Gm24158-201ENSMUST00000175263 71 ntBASIC13.18□□□□□ -0.3
Nkx2-2P42586 Gm43575-201ENSMUST00000196420 516 ntBASIC13.18□□□□□ -0.3
Nkx2-2P42586 Gm5312-201ENSMUST00000203728 547 ntBASIC13.18□□□□□ -0.3
Nkx2-2P42586 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-2P42586 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-2P42586 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-2P42586 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-2P42586 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-2P42586 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-2P42586 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-2P42586 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-2P42586 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-2P42586 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.18□□□□□ -0.3
Nkx2-2P42586 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-2P42586 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-2P42586 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-2P42586 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Nkx2-2P42586 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.18□□□□□ -0.3
Nkx2-2P42586 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.18□□□□□ -0.3
Nkx2-2P42586 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-2P42586 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Nkx2-2P42586 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Nkx2-2P42586 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Nkx2-2P42586 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-2P42586 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.17□□□□□ -0.3
Nkx2-2P42586 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.17□□□□□ -0.3
Nkx2-2P42586 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-2P42586 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-2P42586 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-2P42586 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Nkx2-2P42586 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.17□□□□□ -0.3
Nkx2-2P42586 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-2P42586 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.17□□□□□ -0.3
Nkx2-2P42586 Gm18766-201ENSMUST00000189811 808 ntBASIC13.17□□□□□ -0.3
Nkx2-2P42586 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-2P42586 Gm10253-201ENSMUST00000194270 940 ntBASIC13.17□□□□□ -0.3
Nkx2-2P42586 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.17□□□□□ -0.3
Nkx2-2P42586 Gm8396-201ENSMUST00000057361 823 ntBASIC13.17□□□□□ -0.3
Nkx2-2P42586 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Nkx2-2P42586 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-2P42586 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-2P42586 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-2P42586 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-2P42586 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Nkx2-2P42586 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-2P42586 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-2P42586 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-2P42586 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-2P42586 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-2P42586 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-2P42586 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-2P42586 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-2P42586 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-2P42586 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-2P42586 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-2P42586 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-2P42586 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-2P42586 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-2P42586 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.16□□□□□ -0.3
Nkx2-2P42586 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.16□□□□□ -0.3
Nkx2-2P42586 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-2P42586 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-2P42586 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-2P42586 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-2P42586 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.16□□□□□ -0.3
Nkx2-2P42586 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-2P42586 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Nkx2-2P42586 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-2P42586 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-2P42586 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-2P42586 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms