Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a11P31650 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.65□□□□□ -0.22
Slc6a11P31650 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a11P31650 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a11P31650 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.65□□□□□ -0.22
Slc6a11P31650 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.65□□□□□ -0.22
Slc6a11P31650 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a11P31650 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a11P31650 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.65□□□□□ -0.22
Slc6a11P31650 Gm9726-201ENSMUST00000180321 678 ntBASIC13.65□□□□□ -0.22
Slc6a11P31650 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.65□□□□□ -0.22
Slc6a11P31650 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a11P31650 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a11P31650 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Slc6a11P31650 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a11P31650 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a11P31650 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a11P31650 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a11P31650 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a11P31650 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Slc6a11P31650 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a11P31650 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Slc6a11P31650 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a11P31650 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a11P31650 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a11P31650 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Slc6a11P31650 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.64□□□□□ -0.23
Slc6a11P31650 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a11P31650 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a11P31650 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.64□□□□□ -0.23
Slc6a11P31650 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a11P31650 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a11P31650 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a11P31650 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a11P31650 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a11P31650 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a11P31650 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a11P31650 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a11P31650 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.64□□□□□ -0.23
Slc6a11P31650 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a11P31650 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a11P31650 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Slc6a11P31650 Gm8749-201ENSMUST00000117737 331 ntBASIC13.64□□□□□ -0.23
Slc6a11P31650 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.64□□□□□ -0.23
Slc6a11P31650 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a11P31650 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.64□□□□□ -0.23
Slc6a11P31650 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a11P31650 Gm44492-201ENSMUST00000197012 141 ntBASIC13.64□□□□□ -0.23
Slc6a11P31650 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Slc6a11P31650 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a11P31650 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.64□□□□□ -0.23
Slc6a11P31650 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.64□□□□□ -0.23
Slc6a11P31650 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a11P31650 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a11P31650 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a11P31650 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Slc6a11P31650 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a11P31650 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a11P31650 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a11P31650 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.64□□□□□ -0.23
Slc6a11P31650 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a11P31650 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a11P31650 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.64□□□□□ -0.23
Slc6a11P31650 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a11P31650 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a11P31650 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Slc6a11P31650 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Slc6a11P31650 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a11P31650 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a11P31650 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a11P31650 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.63□□□□□ -0.23
Slc6a11P31650 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Slc6a11P31650 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Slc6a11P31650 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.63□□□□□ -0.23
Slc6a11P31650 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Slc6a11P31650 Gm13464-201ENSMUST00000119418 935 ntBASIC13.63□□□□□ -0.23
Slc6a11P31650 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.63□□□□□ -0.23
Slc6a11P31650 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.63□□□□□ -0.23
Slc6a11P31650 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.63□□□□□ -0.23
Slc6a11P31650 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.63□□□□□ -0.23
Slc6a11P31650 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Slc6a11P31650 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.63□□□□□ -0.23
Slc6a11P31650 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Slc6a11P31650 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.63□□□□□ -0.23
Slc6a11P31650 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Slc6a11P31650 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a11P31650 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a11P31650 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a11P31650 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a11P31650 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a11P31650 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a11P31650 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.63□□□□□ -0.23
Slc6a11P31650 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Slc6a11P31650 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a11P31650 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a11P31650 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a11P31650 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a11P31650 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a11P31650 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a11P31650 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms