Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.82□□□□□ -0.52
Tnfrsf9P20334 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.82□□□□□ -0.52
Tnfrsf9P20334 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.82□□□□□ -0.52
Tnfrsf9P20334 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf9P20334 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC11.81□□□□□ -0.52
Tnfrsf9P20334 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Tnfrsf9P20334 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf9P20334 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf9P20334 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.81□□□□□ -0.52
Tnfrsf9P20334 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf9P20334 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf9P20334 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf9P20334 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf9P20334 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf9P20334 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Tnfrsf9P20334 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.81□□□□□ -0.52
Tnfrsf9P20334 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC11.81□□□□□ -0.52
Tnfrsf9P20334 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf9P20334 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC11.81□□□□□ -0.52
Tnfrsf9P20334 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf9P20334 Gm28196-201ENSMUST00000187719 640 ntBASIC11.81□□□□□ -0.52
Tnfrsf9P20334 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.81□□□□□ -0.52
Tnfrsf9P20334 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf9P20334 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC11.81□□□□□ -0.52
Tnfrsf9P20334 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Tnfrsf9P20334 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC11.81□□□□□ -0.52
Tnfrsf9P20334 Gm10154-201ENSMUST00000084445 354 ntBASIC11.81□□□□□ -0.52
Tnfrsf9P20334 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf9P20334 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf9P20334 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf9P20334 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Tnfrsf9P20334 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.81□□□□□ -0.52
Tnfrsf9P20334 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf9P20334 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf9P20334 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf9P20334 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Gm45133-201ENSMUST00000207548 2773 ntBASIC11.8□□□□□ -0.52
Tnfrsf9P20334 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Gm6415-201ENSMUST00000118488 348 ntBASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.8□□□□□ -0.52
Tnfrsf9P20334 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Gm7653-201ENSMUST00000214567 508 ntBASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf9P20334 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms