Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl3P10855 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl3P10855 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl3P10855 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl3P10855 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccl3P10855 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ccl3P10855 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl3P10855 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl3P10855 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl3P10855 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.63□□□□□ -0.39
Ccl3P10855 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl3P10855 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.63□□□□□ -0.39
Ccl3P10855 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl3P10855 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl3P10855 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.63□□□□□ -0.39
Ccl3P10855 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.63□□□□□ -0.39
Ccl3P10855 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccl3P10855 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Ccl3P10855 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl3P10855 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Ccl3P10855 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl3P10855 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl3P10855 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl3P10855 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl3P10855 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl3P10855 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ccl3P10855 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl3P10855 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl3P10855 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl3P10855 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl3P10855 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl3P10855 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl3P10855 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl3P10855 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccl3P10855 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl3P10855 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.62□□□□□ -0.39
Ccl3P10855 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccl3P10855 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.62□□□□□ -0.39
Ccl3P10855 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.62□□□□□ -0.39
Ccl3P10855 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ccl3P10855 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 Gm6244-201ENSMUST00000178732 841 ntBASIC12.62□□□□□ -0.39
Ccl3P10855 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 Gm27839-201ENSMUST00000184242 106 ntBASIC12.62□□□□□ -0.39
Ccl3P10855 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccl3P10855 Gm37714-201ENSMUST00000194742 342 ntBASIC12.62□□□□□ -0.39
Ccl3P10855 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccl3P10855 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ccl3P10855 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccl3P10855 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccl3P10855 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl3P10855 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl3P10855 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl3P10855 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl3P10855 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl3P10855 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl3P10855 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.61□□□□□ -0.39
Ccl3P10855 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl3P10855 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl3P10855 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Ccl3P10855 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl3P10855 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl3P10855 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ccl3P10855 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl3P10855 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Ccl3P10855 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl3P10855 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl3P10855 Gm15240-201ENSMUST00000118156 720 ntBASIC12.61□□□□□ -0.39
Ccl3P10855 Mir1894-201ENSMUST00000122802 81 ntBASIC12.61□□□□□ -0.39
Ccl3P10855 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms