Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
P06344 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
P06344 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P06344 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06344 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P06344 Gm9719-201ENSMUST00000162765 543 ntBASIC12.81□□□□□ -0.36
P06344 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
P06344 Gm29310-201ENSMUST00000185468 696 ntBASIC12.81□□□□□ -0.36
P06344 Gm21825-201ENSMUST00000185728 696 ntBASIC12.81□□□□□ -0.36
P06344 Gm29109-201ENSMUST00000185895 696 ntBASIC12.81□□□□□ -0.36
P06344 Gm21896-201ENSMUST00000186520 696 ntBASIC12.81□□□□□ -0.36
P06344 Gm21873-201ENSMUST00000186728 696 ntBASIC12.81□□□□□ -0.36
P06344 Gm21794-201ENSMUST00000187056 696 ntBASIC12.81□□□□□ -0.36
P06344 Gm21880-201ENSMUST00000187275 696 ntBASIC12.81□□□□□ -0.36
P06344 Gm21826-201ENSMUST00000187451 696 ntBASIC12.81□□□□□ -0.36
P06344 Gm21198-201ENSMUST00000188393 696 ntBASIC12.81□□□□□ -0.36
P06344 Gm21749-201ENSMUST00000189343 696 ntBASIC12.81□□□□□ -0.36
P06344 Gm21901-201ENSMUST00000189568 696 ntBASIC12.81□□□□□ -0.36
P06344 Gm29424-201ENSMUST00000189716 696 ntBASIC12.81□□□□□ -0.36
P06344 Gm28599-201ENSMUST00000189838 694 ntBASIC12.81□□□□□ -0.36
P06344 Gm21867-201ENSMUST00000189917 696 ntBASIC12.81□□□□□ -0.36
P06344 Gm29269-201ENSMUST00000190087 696 ntBASIC12.81□□□□□ -0.36
P06344 Gm21722-201ENSMUST00000190153 696 ntBASIC12.81□□□□□ -0.36
P06344 Gm28423-201ENSMUST00000190701 696 ntBASIC12.81□□□□□ -0.36
P06344 Gm21899-201ENSMUST00000190745 696 ntBASIC12.81□□□□□ -0.36
P06344 Gm21910-201ENSMUST00000191163 696 ntBASIC12.81□□□□□ -0.36
P06344 Gm21849-201ENSMUST00000191571 696 ntBASIC12.81□□□□□ -0.36
P06344 Gm28678-201ENSMUST00000191593 696 ntBASIC12.81□□□□□ -0.36
P06344 Gm20910-201ENSMUST00000193268 696 ntBASIC12.81□□□□□ -0.36
P06344 Gm21871-201ENSMUST00000194621 696 ntBASIC12.81□□□□□ -0.36
P06344 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P06344 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P06344 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06344 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06344 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06344 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
P06344 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06344 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
P06344 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06344 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
P06344 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.81□□□□□ -0.36
P06344 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06344 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06344 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06344 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
P06344 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
P06344 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
P06344 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P06344 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.81□□□□□ -0.36
P06344 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P06344 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
P06344 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.8□□□□□ -0.36
P06344 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P06344 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.8□□□□□ -0.36
P06344 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P06344 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P06344 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P06344 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P06344 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.8□□□□□ -0.36
P06344 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.8□□□□□ -0.36
P06344 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.8□□□□□ -0.36
P06344 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P06344 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P06344 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P06344 Gm17837-201ENSMUST00000186435 985 ntBASIC12.8□□□□□ -0.36
P06344 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P06344 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P06344 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
P06344 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
P06344 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P06344 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
P06344 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
P06344 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P06344 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P06344 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P06344 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P06344 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
P06344 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P06344 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P06344 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P06344 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P06344 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
P06344 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P06344 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
P06344 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.79□□□□□ -0.36
P06344 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
P06344 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P06344 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P06344 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P06344 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P06344 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P06344 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P06344 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
P06344 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.79□□□□□ -0.36
P06344 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
P06344 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
P06344 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.79□□□□□ -0.36
P06344 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P06344 Gm5566-201ENSMUST00000116118 459 ntBASIC12.79□□□□□ -0.36
P06344 Gm6222-201ENSMUST00000120787 396 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms