Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
Igh-VJ558P01758 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Igh-VJ558P01758 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.41□□□□□ -0.42
Igh-VJ558P01758 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Igh-VJ558P01758 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Igh-VJ558P01758 Gm13015-201ENSMUST00000118674 204 ntBASIC12.41□□□□□ -0.42
Igh-VJ558P01758 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.41□□□□□ -0.42
Igh-VJ558P01758 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Igh-VJ558P01758 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.41□□□□□ -0.42
Igh-VJ558P01758 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.41□□□□□ -0.42
Igh-VJ558P01758 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.41□□□□□ -0.42
Igh-VJ558P01758 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.41□□□□□ -0.42
Igh-VJ558P01758 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.41□□□□□ -0.42
Igh-VJ558P01758 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.41□□□□□ -0.42
Igh-VJ558P01758 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Igh-VJ558P01758 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Igh-VJ558P01758 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Igh-VJ558P01758 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Igh-VJ558P01758 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Igh-VJ558P01758 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Igh-VJ558P01758 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Igh-VJ558P01758 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Igh-VJ558P01758 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.41□□□□□ -0.42
Igh-VJ558P01758 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Igh-VJ558P01758 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Igh-VJ558P01758 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Igh-VJ558P01758 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Igh-VJ558P01758 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Igh-VJ558P01758 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Igh-VJ558P01758 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Igh-VJ558P01758 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Igh-VJ558P01758 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Igh-VJ558P01758 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Igh-VJ558P01758 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.4□□□□□ -0.42
Igh-VJ558P01758 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Igh-VJ558P01758 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Igh-VJ558P01758 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Igh-VJ558P01758 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Igh-VJ558P01758 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Igh-VJ558P01758 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Igh-VJ558P01758 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Igh-VJ558P01758 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Igh-VJ558P01758 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Igh-VJ558P01758 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Igh-VJ558P01758 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Igh-VJ558P01758 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Igh-VJ558P01758 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Igh-VJ558P01758 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.39□□□□□ -0.43
Igh-VJ558P01758 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Igh-VJ558P01758 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Igh-VJ558P01758 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.39□□□□□ -0.43
Igh-VJ558P01758 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.39□□□□□ -0.43
Igh-VJ558P01758 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Igh-VJ558P01758 Mir6990-201ENSMUST00000183724 91 ntBASIC12.39□□□□□ -0.43
Igh-VJ558P01758 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.39□□□□□ -0.43
Igh-VJ558P01758 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Igh-VJ558P01758 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms