Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CcnkO88874 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CcnkO88874 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CcnkO88874 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CcnkO88874 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CcnkO88874 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CcnkO88874 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CcnkO88874 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CcnkO88874 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CcnkO88874 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CcnkO88874 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CcnkO88874 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CcnkO88874 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CcnkO88874 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CcnkO88874 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CcnkO88874 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CcnkO88874 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CcnkO88874 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CcnkO88874 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CcnkO88874 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CcnkO88874 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CcnkO88874 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CcnkO88874 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CcnkO88874 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CcnkO88874 Gm6443-201ENSMUST00000203599 874 ntBASIC12.81□□□□□ -0.36
CcnkO88874 Gm10060-201ENSMUST00000212002 111 ntBASIC12.81□□□□□ -0.36
CcnkO88874 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.81□□□□□ -0.36
CcnkO88874 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.81□□□□□ -0.36
CcnkO88874 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CcnkO88874 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CcnkO88874 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.81□□□□□ -0.36
CcnkO88874 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CcnkO88874 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CcnkO88874 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CcnkO88874 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CcnkO88874 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CcnkO88874 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CcnkO88874 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
CcnkO88874 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CcnkO88874 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
CcnkO88874 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CcnkO88874 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CcnkO88874 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CcnkO88874 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcnkO88874 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcnkO88874 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcnkO88874 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CcnkO88874 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcnkO88874 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CcnkO88874 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcnkO88874 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.8□□□□□ -0.36
CcnkO88874 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcnkO88874 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcnkO88874 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcnkO88874 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcnkO88874 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CcnkO88874 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcnkO88874 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CcnkO88874 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CcnkO88874 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcnkO88874 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CcnkO88874 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.8□□□□□ -0.36
CcnkO88874 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.8□□□□□ -0.36
CcnkO88874 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.8□□□□□ -0.36
CcnkO88874 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.8□□□□□ -0.36
CcnkO88874 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.8□□□□□ -0.36
CcnkO88874 Gm7787-201ENSMUST00000216858 688 ntBASIC12.8□□□□□ -0.36
CcnkO88874 Mzt1-203ENSMUST00000227948 952 ntBASIC12.8□□□□□ -0.36
CcnkO88874 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcnkO88874 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CcnkO88874 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcnkO88874 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcnkO88874 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.8□□□□□ -0.36
CcnkO88874 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcnkO88874 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CcnkO88874 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcnkO88874 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CcnkO88874 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcnkO88874 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CcnkO88874 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.79□□□□□ -0.36
CcnkO88874 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CcnkO88874 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CcnkO88874 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.79□□□□□ -0.36
CcnkO88874 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CcnkO88874 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CcnkO88874 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.79□□□□□ -0.36
CcnkO88874 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CcnkO88874 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CcnkO88874 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CcnkO88874 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CcnkO88874 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CcnkO88874 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CcnkO88874 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CcnkO88874 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.79□□□□□ -0.36
CcnkO88874 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.79□□□□□ -0.36
CcnkO88874 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.79□□□□□ -0.36
CcnkO88874 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
CcnkO88874 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CcnkO88874 AV026068-213ENSMUST00000223675 1171 ntBASIC12.79□□□□□ -0.36
CcnkO88874 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms