Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Vti1bO88384 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1bO88384 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1bO88384 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1bO88384 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Vti1bO88384 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1bO88384 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.72□□□□□ -0.21
Vti1bO88384 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Vti1bO88384 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
Vti1bO88384 Gm43514-201ENSMUST00000198852 424 ntBASIC13.72□□□□□ -0.21
Vti1bO88384 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1bO88384 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1bO88384 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1bO88384 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1bO88384 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1bO88384 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1bO88384 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.72□□□□□ -0.21
Vti1bO88384 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1bO88384 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1bO88384 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Vti1bO88384 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1bO88384 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Vti1bO88384 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Vti1bO88384 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1bO88384 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1bO88384 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1bO88384 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1bO88384 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Vti1bO88384 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1bO88384 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1bO88384 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.71□□□□□ -0.21
Vti1bO88384 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.71□□□□□ -0.21
Vti1bO88384 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.71□□□□□ -0.21
Vti1bO88384 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Vti1bO88384 Gm27525-201ENSMUST00000184465 107 ntBASIC13.71□□□□□ -0.21
Vti1bO88384 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1bO88384 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.71□□□□□ -0.21
Vti1bO88384 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.71□□□□□ -0.21
Vti1bO88384 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1bO88384 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1bO88384 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1bO88384 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vti1bO88384 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.71□□□□□ -0.22
Vti1bO88384 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vti1bO88384 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vti1bO88384 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
Vti1bO88384 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vti1bO88384 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vti1bO88384 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1bO88384 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1bO88384 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1bO88384 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.7□□□□□ -0.22
Vti1bO88384 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1bO88384 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1bO88384 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1bO88384 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1bO88384 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1bO88384 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Vti1bO88384 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Vti1bO88384 Gm12260-201ENSMUST00000122447 411 ntBASIC13.7□□□□□ -0.22
Vti1bO88384 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Vti1bO88384 Gm43767-201ENSMUST00000198933 381 ntBASIC13.7□□□□□ -0.22
Vti1bO88384 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Vti1bO88384 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1bO88384 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.7□□□□□ -0.22
Vti1bO88384 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1bO88384 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Vti1bO88384 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1bO88384 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.7□□□□□ -0.22
Vti1bO88384 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1bO88384 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1bO88384 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1bO88384 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1bO88384 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.7□□□□□ -0.22
Vti1bO88384 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.7□□□□□ -0.22
Vti1bO88384 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.7□□□□□ -0.22
Vti1bO88384 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vti1bO88384 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1bO88384 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Vti1bO88384 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1bO88384 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Vti1bO88384 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1bO88384 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1bO88384 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1bO88384 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Vti1bO88384 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1bO88384 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Vti1bO88384 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Vti1bO88384 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1bO88384 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.69□□□□□ -0.22
Vti1bO88384 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1bO88384 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1bO88384 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1bO88384 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1bO88384 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.69□□□□□ -0.22
Vti1bO88384 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.69□□□□□ -0.22
Vti1bO88384 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.69□□□□□ -0.22
Vti1bO88384 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1bO88384 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vti1bO88384 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms