Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.08□□□□□ -0.16
Cbx4O55187 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.08□□□□□ -0.16
Cbx4O55187 Gm11745-201ENSMUST00000121669 448 ntBASIC14.08□□□□□ -0.16
Cbx4O55187 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cbx4O55187 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cbx4O55187 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cbx4O55187 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cbx4O55187 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cbx4O55187 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cbx4O55187 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Cbx4O55187 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Cbx4O55187 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cbx4O55187 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cbx4O55187 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cbx4O55187 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cbx4O55187 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cbx4O55187 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cbx4O55187 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cbx4O55187 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cbx4O55187 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cbx4O55187 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cbx4O55187 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cbx4O55187 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cbx4O55187 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx4O55187 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx4O55187 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx4O55187 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx4O55187 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx4O55187 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx4O55187 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx4O55187 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cbx4O55187 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cbx4O55187 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx4O55187 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx4O55187 Gm2810-201ENSMUST00000118681 990 ntBASIC14.07□□□□□ -0.16
Cbx4O55187 Gm27494-201ENSMUST00000184735 189 ntBASIC14.07□□□□□ -0.16
Cbx4O55187 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.07□□□□□ -0.16
Cbx4O55187 Gm2756-201ENSMUST00000195851 400 ntBASIC14.07□□□□□ -0.16
Cbx4O55187 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx4O55187 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Cbx4O55187 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx4O55187 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx4O55187 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx4O55187 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.07□□□□□ -0.16
Cbx4O55187 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx4O55187 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cbx4O55187 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx4O55187 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx4O55187 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx4O55187 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx4O55187 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Cbx4O55187 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx4O55187 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx4O55187 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx4O55187 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx4O55187 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx4O55187 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cbx4O55187 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx4O55187 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx4O55187 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.06□□□□□ -0.16
Cbx4O55187 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cbx4O55187 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx4O55187 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.06□□□□□ -0.16
Cbx4O55187 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.06□□□□□ -0.16
Cbx4O55187 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx4O55187 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx4O55187 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.06□□□□□ -0.16
Cbx4O55187 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx4O55187 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.06□□□□□ -0.16
Cbx4O55187 Mir1895-201ENSMUST00000122615 79 ntBASIC14.06□□□□□ -0.16
Cbx4O55187 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.06□□□□□ -0.16
Cbx4O55187 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.06□□□□□ -0.16
Cbx4O55187 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx4O55187 Gm10275-202ENSMUST00000168697 495 ntBASIC14.06□□□□□ -0.16
Cbx4O55187 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.06□□□□□ -0.16
Cbx4O55187 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.06□□□□□ -0.16
Cbx4O55187 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cbx4O55187 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.06□□□□□ -0.16
Cbx4O55187 Gm10275-201ENSMUST00000092620 635 ntBASIC14.06□□□□□ -0.16
Cbx4O55187 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx4O55187 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Cbx4O55187 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx4O55187 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx4O55187 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx4O55187 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.06□□□□□ -0.16
Cbx4O55187 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx4O55187 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx4O55187 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx4O55187 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx4O55187 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx4O55187 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx4O55187 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cbx4O55187 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx4O55187 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cbx4O55187 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cbx4O55187 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cbx4O55187 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.05□□□□□ -0.16
Cbx4O55187 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cbx4O55187 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cbx4O55187 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms