Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf13O54965 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf13O54965 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.04□□□□□ -0.32
Rnf13O54965 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf13O54965 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf13O54965 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Rnf13O54965 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf13O54965 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.04□□□□□ -0.32
Rnf13O54965 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf13O54965 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.04□□□□□ -0.32
Rnf13O54965 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.04□□□□□ -0.32
Rnf13O54965 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.04□□□□□ -0.32
Rnf13O54965 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf13O54965 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf13O54965 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf13O54965 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf13O54965 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf13O54965 Matn2-206ENSMUST00000228570 2798 ntBASIC13.04□□□□□ -0.32
Rnf13O54965 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf13O54965 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.04□□□□□ -0.32
Rnf13O54965 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf13O54965 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf13O54965 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf13O54965 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf13O54965 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf13O54965 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.04□□□□□ -0.32
Rnf13O54965 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf13O54965 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf13O54965 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Rnf13O54965 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Rnf13O54965 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf13O54965 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.04□□□□□ -0.32
Rnf13O54965 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf13O54965 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.03□□□□□ -0.32
Rnf13O54965 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf13O54965 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rnf13O54965 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rnf13O54965 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf13O54965 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf13O54965 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rnf13O54965 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf13O54965 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf13O54965 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf13O54965 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rnf13O54965 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf13O54965 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf13O54965 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rnf13O54965 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Rnf13O54965 Gm14042-201ENSMUST00000120139 833 ntBASIC13.03□□□□□ -0.32
Rnf13O54965 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.03□□□□□ -0.32
Rnf13O54965 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.03□□□□□ -0.32
Rnf13O54965 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rnf13O54965 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rnf13O54965 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Rnf13O54965 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf13O54965 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf13O54965 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf13O54965 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.03□□□□□ -0.32
Rnf13O54965 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.03□□□□□ -0.32
Rnf13O54965 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf13O54965 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf13O54965 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf13O54965 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.03□□□□□ -0.32
Rnf13O54965 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf13O54965 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf13O54965 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf13O54965 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf13O54965 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf13O54965 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf13O54965 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf13O54965 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf13O54965 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf13O54965 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rnf13O54965 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf13O54965 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf13O54965 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rnf13O54965 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Rnf13O54965 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf13O54965 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Rnf13O54965 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf13O54965 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf13O54965 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Rnf13O54965 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf13O54965 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf13O54965 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf13O54965 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf13O54965 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf13O54965 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.02□□□□□ -0.33
Rnf13O54965 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf13O54965 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.02□□□□□ -0.33
Rnf13O54965 Gm2451-201ENSMUST00000199447 999 ntBASIC13.02□□□□□ -0.33
Rnf13O54965 Gm10290-201ENSMUST00000200451 999 ntBASIC13.02□□□□□ -0.33
Rnf13O54965 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rnf13O54965 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.02□□□□□ -0.33
Rnf13O54965 Olfr286-202ENSMUST00000205305 969 ntBASIC13.02□□□□□ -0.33
Rnf13O54965 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf13O54965 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf13O54965 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf13O54965 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf13O54965 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms