Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Colca2F8VPY8 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Colca2F8VPY8 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.48□□□□□ -0.25
Colca2F8VPY8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Colca2F8VPY8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Colca2F8VPY8 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Colca2F8VPY8 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Colca2F8VPY8 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Colca2F8VPY8 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Colca2F8VPY8 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.47□□□□□ -0.25
Colca2F8VPY8 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Colca2F8VPY8 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Colca2F8VPY8 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Colca2F8VPY8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Colca2F8VPY8 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Colca2F8VPY8 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Colca2F8VPY8 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Colca2F8VPY8 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Colca2F8VPY8 Gm8213-201ENSMUST00000118191 441 ntBASIC13.47□□□□□ -0.25
Colca2F8VPY8 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Colca2F8VPY8 Gm10156-201ENSMUST00000122364 462 ntBASIC13.47□□□□□ -0.25
Colca2F8VPY8 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Colca2F8VPY8 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Colca2F8VPY8 Gm6152-201ENSMUST00000151704 340 ntBASIC13.47□□□□□ -0.25
Colca2F8VPY8 Gm8810-201ENSMUST00000172895 754 ntBASIC13.47□□□□□ -0.25
Colca2F8VPY8 Proscos-202ENSMUST00000178990 666 ntBASIC13.47□□□□□ -0.25
Colca2F8VPY8 Mir8109-201ENSMUST00000184375 117 ntBASIC13.47□□□□□ -0.25
Colca2F8VPY8 Gm38241-201ENSMUST00000192641 898 ntBASIC13.47□□□□□ -0.25
Colca2F8VPY8 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.47□□□□□ -0.25
Colca2F8VPY8 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Colca2F8VPY8 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.47□□□□□ -0.25
Colca2F8VPY8 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Colca2F8VPY8 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Colca2F8VPY8 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Colca2F8VPY8 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Colca2F8VPY8 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Colca2F8VPY8 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Colca2F8VPY8 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Colca2F8VPY8 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Colca2F8VPY8 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Colca2F8VPY8 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Colca2F8VPY8 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Colca2F8VPY8 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Colca2F8VPY8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Colca2F8VPY8 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.47□□□□□ -0.25
Colca2F8VPY8 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Colca2F8VPY8 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Colca2F8VPY8 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Colca2F8VPY8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Colca2F8VPY8 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Colca2F8VPY8 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Colca2F8VPY8 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.46□□□□□ -0.25
Colca2F8VPY8 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
Colca2F8VPY8 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Colca2F8VPY8 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.46□□□□□ -0.25
Colca2F8VPY8 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Colca2F8VPY8 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Colca2F8VPY8 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.46□□□□□ -0.25
Colca2F8VPY8 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Colca2F8VPY8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Colca2F8VPY8 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Colca2F8VPY8 Gm15236-201ENSMUST00000117309 379 ntBASIC13.46□□□□□ -0.25
Colca2F8VPY8 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Colca2F8VPY8 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.46□□□□□ -0.25
Colca2F8VPY8 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.46□□□□□ -0.25
Colca2F8VPY8 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Colca2F8VPY8 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Colca2F8VPY8 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Colca2F8VPY8 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Colca2F8VPY8 Gm27243-201ENSMUST00000183964 521 ntBASIC13.46□□□□□ -0.25
Colca2F8VPY8 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.46□□□□□ -0.25
Colca2F8VPY8 Gm38002-201ENSMUST00000193255 180 ntBASIC13.46□□□□□ -0.25
Colca2F8VPY8 Gm43822-201ENSMUST00000200285 476 ntBASIC13.46□□□□□ -0.25
Colca2F8VPY8 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Colca2F8VPY8 Gm29705-201ENSMUST00000212598 474 ntBASIC13.46□□□□□ -0.25
Colca2F8VPY8 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.46□□□□□ -0.25
Colca2F8VPY8 Gm9823-201ENSMUST00000051212 327 ntBASIC13.46□□□□□ -0.25
Colca2F8VPY8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Colca2F8VPY8 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Colca2F8VPY8 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Colca2F8VPY8 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Colca2F8VPY8 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.46□□□□□ -0.26
Colca2F8VPY8 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Colca2F8VPY8 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.46□□□□□ -0.26
Colca2F8VPY8 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Colca2F8VPY8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Colca2F8VPY8 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Colca2F8VPY8 BC037039-201ENSMUST00000192003 2205 ntBASIC13.45□□□□□ -0.26
Colca2F8VPY8 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Colca2F8VPY8 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Colca2F8VPY8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Colca2F8VPY8 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Colca2F8VPY8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Colca2F8VPY8 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Colca2F8VPY8 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.45□□□□□ -0.26
Colca2F8VPY8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Colca2F8VPY8 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Colca2F8VPY8 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Colca2F8VPY8 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Colca2F8VPY8 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms