Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Srp54bE9PXC0 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Srp54bE9PXC0 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Srp54bE9PXC0 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.15□□□□□ -0.14
Srp54bE9PXC0 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Srp54bE9PXC0 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Srp54bE9PXC0 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Srp54bE9PXC0 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Srp54bE9PXC0 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Srp54bE9PXC0 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Srp54bE9PXC0 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Srp54bE9PXC0 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Srp54bE9PXC0 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Srp54bE9PXC0 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Srp54bE9PXC0 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Srp54bE9PXC0 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srp54bE9PXC0 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Srp54bE9PXC0 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.14□□□□□ -0.15
Srp54bE9PXC0 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srp54bE9PXC0 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srp54bE9PXC0 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Srp54bE9PXC0 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srp54bE9PXC0 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srp54bE9PXC0 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Srp54bE9PXC0 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srp54bE9PXC0 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srp54bE9PXC0 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Srp54bE9PXC0 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Srp54bE9PXC0 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srp54bE9PXC0 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.14□□□□□ -0.15
Srp54bE9PXC0 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Srp54bE9PXC0 Gm9522-201ENSMUST00000182394 926 ntBASIC14.14□□□□□ -0.15
Srp54bE9PXC0 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.14□□□□□ -0.15
Srp54bE9PXC0 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.14□□□□□ -0.15
Srp54bE9PXC0 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.14□□□□□ -0.15
Srp54bE9PXC0 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Srp54bE9PXC0 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Srp54bE9PXC0 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srp54bE9PXC0 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srp54bE9PXC0 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srp54bE9PXC0 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srp54bE9PXC0 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srp54bE9PXC0 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srp54bE9PXC0 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Srp54bE9PXC0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Srp54bE9PXC0 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srp54bE9PXC0 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Srp54bE9PXC0 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Srp54bE9PXC0 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Srp54bE9PXC0 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srp54bE9PXC0 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Srp54bE9PXC0 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.13□□□□□ -0.15
Srp54bE9PXC0 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Srp54bE9PXC0 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srp54bE9PXC0 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Srp54bE9PXC0 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srp54bE9PXC0 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Srp54bE9PXC0 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srp54bE9PXC0 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srp54bE9PXC0 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srp54bE9PXC0 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.13□□□□□ -0.15
Srp54bE9PXC0 Gm6916-202ENSMUST00000205523 195 ntBASIC14.13□□□□□ -0.15
Srp54bE9PXC0 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.13□□□□□ -0.15
Srp54bE9PXC0 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.13□□□□□ -0.15
Srp54bE9PXC0 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.13□□□□□ -0.15
Srp54bE9PXC0 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.13□□□□□ -0.15
Srp54bE9PXC0 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srp54bE9PXC0 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srp54bE9PXC0 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.13□□□□□ -0.15
Srp54bE9PXC0 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srp54bE9PXC0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Srp54bE9PXC0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Srp54bE9PXC0 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srp54bE9PXC0 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Srp54bE9PXC0 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srp54bE9PXC0 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Srp54bE9PXC0 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.12□□□□□ -0.15
Srp54bE9PXC0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srp54bE9PXC0 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srp54bE9PXC0 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srp54bE9PXC0 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Srp54bE9PXC0 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srp54bE9PXC0 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.12□□□□□ -0.15
Srp54bE9PXC0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srp54bE9PXC0 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srp54bE9PXC0 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srp54bE9PXC0 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srp54bE9PXC0 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.12□□□□□ -0.15
Srp54bE9PXC0 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Srp54bE9PXC0 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Srp54bE9PXC0 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Srp54bE9PXC0 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.12□□□□□ -0.15
Srp54bE9PXC0 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.12□□□□□ -0.15
Srp54bE9PXC0 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srp54bE9PXC0 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srp54bE9PXC0 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Srp54bE9PXC0 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.12□□□□□ -0.15
Srp54bE9PXC0 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Srp54bE9PXC0 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Srp54bE9PXC0 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms