Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn1aA2APX8 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Scn1aA2APX8 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Scn1aA2APX8 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn1aA2APX8 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn1aA2APX8 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Scn1aA2APX8 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.99□□□□□ -0.01
Scn1aA2APX8 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn1aA2APX8 Gm20445-201ENSMUST00000061905 565 ntBASIC14.99□□□□□ -0.01
Scn1aA2APX8 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Scn1aA2APX8 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn1aA2APX8 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Scn1aA2APX8 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.98□□□□□ -0.01
Scn1aA2APX8 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn1aA2APX8 Syt7-204ENSMUST00000223586 1344 ntBASIC14.98□□□□□ -0.01
Scn1aA2APX8 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Scn1aA2APX8 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn1aA2APX8 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn1aA2APX8 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn1aA2APX8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Scn1aA2APX8 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Scn1aA2APX8 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Scn1aA2APX8 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Scn1aA2APX8 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Scn1aA2APX8 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn1aA2APX8 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Scn1aA2APX8 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn1aA2APX8 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Scn1aA2APX8 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Scn1aA2APX8 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn1aA2APX8 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn1aA2APX8 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn1aA2APX8 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Scn1aA2APX8 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.98□□□□□ -0.01
Scn1aA2APX8 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.98□□□□□ -0.01
Scn1aA2APX8 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Scn1aA2APX8 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn1aA2APX8 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.98□□□□□ -0.01
Scn1aA2APX8 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn1aA2APX8 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn1aA2APX8 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn1aA2APX8 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.98□□□□□ -0.01
Scn1aA2APX8 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn1aA2APX8 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.98□□□□□ -0.01
Scn1aA2APX8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn1aA2APX8 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn1aA2APX8 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn1aA2APX8 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn1aA2APX8 Gm15393-201ENSMUST00000120499 219 ntBASIC14.97□□□□□ -0.01
Scn1aA2APX8 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.97□□□□□ -0.01
Scn1aA2APX8 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn1aA2APX8 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn1aA2APX8 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn1aA2APX8 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn1aA2APX8 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn1aA2APX8 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn1aA2APX8 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Scn1aA2APX8 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.97□□□□□ -0.01
Scn1aA2APX8 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn1aA2APX8 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn1aA2APX8 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn1aA2APX8 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn1aA2APX8 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Scn1aA2APX8 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn1aA2APX8 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn1aA2APX8 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn1aA2APX8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn1aA2APX8 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn1aA2APX8 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Scn1aA2APX8 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Scn1aA2APX8 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn1aA2APX8 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Scn1aA2APX8 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Scn1aA2APX8 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn1aA2APX8 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Scn1aA2APX8 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.97□□□□□ -0.01
Scn1aA2APX8 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Scn1aA2APX8 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn1aA2APX8 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn1aA2APX8 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn1aA2APX8 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn1aA2APX8 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn1aA2APX8 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn1aA2APX8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Scn1aA2APX8 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn1aA2APX8 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Scn1aA2APX8 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn1aA2APX8 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn1aA2APX8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn1aA2APX8 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn1aA2APX8 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Scn1aA2APX8 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.96□□□□□ -0.01
Scn1aA2APX8 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Scn1aA2APX8 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Scn1aA2APX8 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.96□□□□□ -0.01
Scn1aA2APX8 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.96□□□□□ -0.01
Scn1aA2APX8 Gm9797-201ENSMUST00000052902 613 ntBASIC14.96□□□□□ -0.01
Scn1aA2APX8 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn1aA2APX8 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.96□□□□□ -0.01
Scn1aA2APX8 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms