Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav6n-6A0A075B6B2 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav6n-6A0A075B6B2 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav6n-6A0A075B6B2 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav6n-6A0A075B6B2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav6n-6A0A075B6B2 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav6n-6A0A075B6B2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav6n-6A0A075B6B2 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav6n-6A0A075B6B2 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav6n-6A0A075B6B2 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav6n-6A0A075B6B2 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav6n-6A0A075B6B2 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav6n-6A0A075B6B2 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Trav6n-6A0A075B6B2 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav6n-6A0A075B6B2 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav6n-6A0A075B6B2 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Gm15173-201ENSMUST00000122049 433 ntBASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Gm7286-201ENSMUST00000182691 1007 ntBASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Gm6550-201ENSMUST00000187574 993 ntBASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Gm7787-201ENSMUST00000216858 688 ntBASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 AC158538.2-201ENSMUST00000225455 906 ntBASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Gm7461-201ENSMUST00000058918 827 ntBASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav6n-6A0A075B6B2 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav6n-6A0A075B6B2 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav6n-6A0A075B6B2 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav6n-6A0A075B6B2 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC10.73□□□□□ -0.69
Trav6n-6A0A075B6B2 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms