Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdh17Q9R100 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdh17Q9R100 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Cdh17Q9R100 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Cdh17Q9R100 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdh17Q9R100 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdh17Q9R100 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Cdh17Q9R100 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdh17Q9R100 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdh17Q9R100 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdh17Q9R100 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdh17Q9R100 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdh17Q9R100 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdh17Q9R100 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh17Q9R100 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh17Q9R100 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cdh17Q9R100 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh17Q9R100 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh17Q9R100 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh17Q9R100 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh17Q9R100 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.02□□□□□ -0.17
Cdh17Q9R100 Rpph1-201ENSMUST00000175096 319 ntBASIC14.02□□□□□ -0.17
Cdh17Q9R100 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh17Q9R100 Gm27920-201ENSMUST00000183953 96 ntBASIC14.02□□□□□ -0.17
Cdh17Q9R100 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cdh17Q9R100 Mzt1-203ENSMUST00000227948 952 ntBASIC14.02□□□□□ -0.17
Cdh17Q9R100 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh17Q9R100 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh17Q9R100 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh17Q9R100 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Cdh17Q9R100 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cdh17Q9R100 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh17Q9R100 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh17Q9R100 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh17Q9R100 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh17Q9R100 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh17Q9R100 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdh17Q9R100 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh17Q9R100 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh17Q9R100 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh17Q9R100 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh17Q9R100 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh17Q9R100 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh17Q9R100 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh17Q9R100 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh17Q9R100 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh17Q9R100 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh17Q9R100 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh17Q9R100 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh17Q9R100 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.01□□□□□ -0.17
Cdh17Q9R100 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.01□□□□□ -0.17
Cdh17Q9R100 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.01□□□□□ -0.17
Cdh17Q9R100 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh17Q9R100 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh17Q9R100 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.01□□□□□ -0.17
Cdh17Q9R100 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh17Q9R100 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh17Q9R100 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.01□□□□□ -0.17
Cdh17Q9R100 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh17Q9R100 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh17Q9R100 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh17Q9R100 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh17Q9R100 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh17Q9R100 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh17Q9R100 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh17Q9R100 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.01□□□□□ -0.17
Cdh17Q9R100 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh17Q9R100 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh17Q9R100 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh17Q9R100 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh17Q9R100 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh17Q9R100 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh17Q9R100 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdh17Q9R100 Gm19863-201ENSMUST00000192480 2218 ntBASIC14□□□□□ -0.17
Cdh17Q9R100 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh17Q9R100 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cdh17Q9R100 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh17Q9R100 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh17Q9R100 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdh17Q9R100 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Cdh17Q9R100 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh17Q9R100 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh17Q9R100 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh17Q9R100 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdh17Q9R100 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh17Q9R100 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh17Q9R100 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh17Q9R100 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh17Q9R100 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh17Q9R100 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdh17Q9R100 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdh17Q9R100 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cdh17Q9R100 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14□□□□□ -0.17
Cdh17Q9R100 CT030684.1-201ENSMUST00000227292 914 ntBASIC14□□□□□ -0.17
Cdh17Q9R100 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh17Q9R100 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh17Q9R100 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh17Q9R100 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh17Q9R100 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh17Q9R100 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms