Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Gm9172-201ENSMUST00000212092 954 ntBASIC12.19□□□□□ -0.46
Six6Q9QZ28 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six6Q9QZ28 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six6Q9QZ28 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Six6Q9QZ28 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.19□□□□□ -0.46
Six6Q9QZ28 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six6Q9QZ28 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six6Q9QZ28 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six6Q9QZ28 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Six6Q9QZ28 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six6Q9QZ28 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six6Q9QZ28 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Six6Q9QZ28 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six6Q9QZ28 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Six6Q9QZ28 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Six6Q9QZ28 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Six6Q9QZ28 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six6Q9QZ28 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six6Q9QZ28 Gm8344-201ENSMUST00000119813 856 ntBASIC12.18□□□□□ -0.46
Six6Q9QZ28 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.18□□□□□ -0.46
Six6Q9QZ28 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.18□□□□□ -0.46
Six6Q9QZ28 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Six6Q9QZ28 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.18□□□□□ -0.46
Six6Q9QZ28 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Six6Q9QZ28 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six6Q9QZ28 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six6Q9QZ28 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six6Q9QZ28 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six6Q9QZ28 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Six6Q9QZ28 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six6Q9QZ28 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Six6Q9QZ28 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six6Q9QZ28 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six6Q9QZ28 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six6Q9QZ28 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six6Q9QZ28 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six6Q9QZ28 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six6Q9QZ28 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six6Q9QZ28 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six6Q9QZ28 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six6Q9QZ28 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six6Q9QZ28 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.17□□□□□ -0.46
Six6Q9QZ28 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Six6Q9QZ28 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six6Q9QZ28 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Six6Q9QZ28 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six6Q9QZ28 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six6Q9QZ28 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six6Q9QZ28 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.17□□□□□ -0.46
Six6Q9QZ28 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Six6Q9QZ28 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Six6Q9QZ28 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Six6Q9QZ28 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Six6Q9QZ28 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Six6Q9QZ28 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six6Q9QZ28 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Six6Q9QZ28 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Six6Q9QZ28 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six6Q9QZ28 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.17□□□□□ -0.46
Six6Q9QZ28 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.17□□□□□ -0.46
Six6Q9QZ28 Gm45058-201ENSMUST00000205810 766 ntBASIC12.17□□□□□ -0.46
Six6Q9QZ28 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.17□□□□□ -0.46
Six6Q9QZ28 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six6Q9QZ28 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six6Q9QZ28 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Six6Q9QZ28 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six6Q9QZ28 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Six6Q9QZ28 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Six6Q9QZ28 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Six6Q9QZ28 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six6Q9QZ28 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Six6Q9QZ28 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six6Q9QZ28 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six6Q9QZ28 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Six6Q9QZ28 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Six6Q9QZ28 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms