Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Gm10275-202ENSMUST00000168697 495 ntBASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Gm28630-201ENSMUST00000187806 498 ntBASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Gm10275-201ENSMUST00000092620 635 ntBASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssmem1Q9D9Y8 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 Gm27622-201ENSMUST00000183779 60 ntBASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssmem1Q9D9Y8 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.42□□□□□ -0.42
Ssmem1Q9D9Y8 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.42□□□□□ -0.42
Ssmem1Q9D9Y8 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssmem1Q9D9Y8 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssmem1Q9D9Y8 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssmem1Q9D9Y8 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Ssmem1Q9D9Y8 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.42□□□□□ -0.42
Ssmem1Q9D9Y8 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssmem1Q9D9Y8 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.42□□□□□ -0.42
Ssmem1Q9D9Y8 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssmem1Q9D9Y8 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssmem1Q9D9Y8 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.42□□□□□ -0.42
Ssmem1Q9D9Y8 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ssmem1Q9D9Y8 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssmem1Q9D9Y8 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssmem1Q9D9Y8 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssmem1Q9D9Y8 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.42□□□□□ -0.42
Ssmem1Q9D9Y8 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Ssmem1Q9D9Y8 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssmem1Q9D9Y8 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.42□□□□□ -0.42
Ssmem1Q9D9Y8 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssmem1Q9D9Y8 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.42□□□□□ -0.42
Ssmem1Q9D9Y8 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms