Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Gm6433-201ENSMUST00000118634 875 ntBASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Gm4459-201ENSMUST00000118750 468 ntBASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3bl1Q9D701 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 Gm15794-201ENSMUST00000120182 631 ntBASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 Gm25745-201ENSMUST00000174945 133 ntBASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3bl1Q9D701 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3bl1Q9D701 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3bl1Q9D701 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3bl1Q9D701 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.1□□□□□ -0.31
Upk3bl1Q9D701 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Upk3bl1Q9D701 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3bl1Q9D701 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3bl1Q9D701 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3bl1Q9D701 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3bl1Q9D701 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3bl1Q9D701 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3bl1Q9D701 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.1□□□□□ -0.31
Upk3bl1Q9D701 Gm25116-201ENSMUST00000157191 122 ntBASIC13.1□□□□□ -0.31
Upk3bl1Q9D701 Rprl3-201ENSMUST00000157400 290 ntBASIC13.1□□□□□ -0.31
Upk3bl1Q9D701 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Upk3bl1Q9D701 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3bl1Q9D701 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Upk3bl1Q9D701 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3bl1Q9D701 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Upk3bl1Q9D701 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3bl1Q9D701 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3bl1Q9D701 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3bl1Q9D701 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3bl1Q9D701 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3bl1Q9D701 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Upk3bl1Q9D701 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.1□□□□□ -0.31
Upk3bl1Q9D701 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3bl1Q9D701 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Upk3bl1Q9D701 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms