Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh15Q99PJ1 Gm6082-201ENSMUST00000215204 454 ntBASIC15.95■□□□□ 0.14
Pcdh15Q99PJ1 Gm7046-201ENSMUST00000221351 977 ntBASIC15.95■□□□□ 0.14
Pcdh15Q99PJ1 Gm24447-201ENSMUST00000083977 338 ntBASIC15.95■□□□□ 0.14
Pcdh15Q99PJ1 Gm10268-201ENSMUST00000085340 555 ntBASIC15.95■□□□□ 0.14
Pcdh15Q99PJ1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Pcdh15Q99PJ1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh15Q99PJ1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh15Q99PJ1 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh15Q99PJ1 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh15Q99PJ1 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh15Q99PJ1 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh15Q99PJ1 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh15Q99PJ1 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Pcdh15Q99PJ1 Gm37922-201ENSMUST00000195596 455 ntBASIC15.94■□□□□ 0.14
Pcdh15Q99PJ1 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Pcdh15Q99PJ1 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh15Q99PJ1 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Pcdh15Q99PJ1 Mir433-201ENSMUST00000093564 124 ntBASIC15.94■□□□□ 0.14
Pcdh15Q99PJ1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh15Q99PJ1 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC15.94■□□□□ 0.14
Pcdh15Q99PJ1 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh15Q99PJ1 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Pcdh15Q99PJ1 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
Pcdh15Q99PJ1 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh15Q99PJ1 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh15Q99PJ1 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh15Q99PJ1 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh15Q99PJ1 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh15Q99PJ1 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
Pcdh15Q99PJ1 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh15Q99PJ1 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh15Q99PJ1 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.94■□□□□ 0.14
Pcdh15Q99PJ1 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh15Q99PJ1 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh15Q99PJ1 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC15.94■□□□□ 0.14
Pcdh15Q99PJ1 Gm2824-203ENSMUST00000226189 1228 ntBASIC15.94■□□□□ 0.14
Pcdh15Q99PJ1 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh15Q99PJ1 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Pcdh15Q99PJ1 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh15Q99PJ1 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh15Q99PJ1 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh15Q99PJ1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh15Q99PJ1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
Pcdh15Q99PJ1 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh15Q99PJ1 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh15Q99PJ1 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh15Q99PJ1 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdh15Q99PJ1 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh15Q99PJ1 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdh15Q99PJ1 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh15Q99PJ1 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15.93■□□□□ 0.14
Pcdh15Q99PJ1 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh15Q99PJ1 Gm15770-201ENSMUST00000117498 584 ntBASIC15.93■□□□□ 0.14
Pcdh15Q99PJ1 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh15Q99PJ1 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdh15Q99PJ1 Gm5363-201ENSMUST00000211927 938 ntBASIC15.93■□□□□ 0.14
Pcdh15Q99PJ1 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh15Q99PJ1 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh15Q99PJ1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh15Q99PJ1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh15Q99PJ1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Pcdh15Q99PJ1 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.93■□□□□ 0.14
Pcdh15Q99PJ1 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh15Q99PJ1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh15Q99PJ1 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh15Q99PJ1 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Pcdh15Q99PJ1 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Pcdh15Q99PJ1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Pcdh15Q99PJ1 Gm24255-201ENSMUST00000104481 128 ntBASIC15.92■□□□□ 0.14
Pcdh15Q99PJ1 Gm14350-201ENSMUST00000116642 640 ntBASIC15.92■□□□□ 0.14
Pcdh15Q99PJ1 Gm13297-201ENSMUST00000120205 934 ntBASIC15.92■□□□□ 0.14
Pcdh15Q99PJ1 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC15.92■□□□□ 0.14
Pcdh15Q99PJ1 Gm27320-201ENSMUST00000184892 109 ntBASIC15.92■□□□□ 0.14
Pcdh15Q99PJ1 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh15Q99PJ1 n-R5s195-201ENSMUST00000082891 119 ntBASIC15.92■□□□□ 0.14
Pcdh15Q99PJ1 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.92■□□□□ 0.14
Pcdh15Q99PJ1 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh15Q99PJ1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh15Q99PJ1 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh15Q99PJ1 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh15Q99PJ1 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.92■□□□□ 0.14
Pcdh15Q99PJ1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.92■□□□□ 0.14
Pcdh15Q99PJ1 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh15Q99PJ1 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh15Q99PJ1 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.92■□□□□ 0.14
Pcdh15Q99PJ1 Gm15370-201ENSMUST00000117158 253 ntBASIC15.92■□□□□ 0.14
Pcdh15Q99PJ1 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC15.92■□□□□ 0.14
Pcdh15Q99PJ1 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC15.92■□□□□ 0.14
Pcdh15Q99PJ1 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.92■□□□□ 0.14
Pcdh15Q99PJ1 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15.92■□□□□ 0.14
Pcdh15Q99PJ1 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC15.92■□□□□ 0.14
Pcdh15Q99PJ1 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC15.92■□□□□ 0.14
Pcdh15Q99PJ1 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC15.92■□□□□ 0.14
Pcdh15Q99PJ1 Mir5132-201ENSMUST00000175166 71 ntBASIC15.92■□□□□ 0.14
Pcdh15Q99PJ1 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh15Q99PJ1 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.91■□□□□ 0.14
Pcdh15Q99PJ1 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh15Q99PJ1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh15Q99PJ1 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms