Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd2Q99JR8 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd2Q99JR8 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Smarcd2Q99JR8 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd2Q99JR8 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.5□□□□□ -0.09
Smarcd2Q99JR8 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd2Q99JR8 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd2Q99JR8 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd2Q99JR8 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd2Q99JR8 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd2Q99JR8 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd2Q99JR8 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd2Q99JR8 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd2Q99JR8 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Smarcd2Q99JR8 Gm15678-201ENSMUST00000117573 960 ntBASIC14.49□□□□□ -0.09
Smarcd2Q99JR8 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd2Q99JR8 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Smarcd2Q99JR8 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd2Q99JR8 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.49□□□□□ -0.09
Smarcd2Q99JR8 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Smarcd2Q99JR8 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.49□□□□□ -0.09
Smarcd2Q99JR8 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd2Q99JR8 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.49□□□□□ -0.09
Smarcd2Q99JR8 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.49□□□□□ -0.09
Smarcd2Q99JR8 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd2Q99JR8 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Smarcd2Q99JR8 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd2Q99JR8 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.49□□□□□ -0.09
Smarcd2Q99JR8 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.49□□□□□ -0.09
Smarcd2Q99JR8 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd2Q99JR8 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd2Q99JR8 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.49□□□□□ -0.09
Smarcd2Q99JR8 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd2Q99JR8 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd2Q99JR8 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd2Q99JR8 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd2Q99JR8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd2Q99JR8 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd2Q99JR8 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd2Q99JR8 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd2Q99JR8 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd2Q99JR8 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd2Q99JR8 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Smarcd2Q99JR8 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd2Q99JR8 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd2Q99JR8 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Smarcd2Q99JR8 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Smarcd2Q99JR8 Gm18307-201ENSMUST00000206864 949 ntBASIC14.48□□□□□ -0.09
Smarcd2Q99JR8 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd2Q99JR8 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Smarcd2Q99JR8 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd2Q99JR8 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd2Q99JR8 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd2Q99JR8 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd2Q99JR8 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd2Q99JR8 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd2Q99JR8 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Smarcd2Q99JR8 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd2Q99JR8 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd2Q99JR8 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd2Q99JR8 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Smarcd2Q99JR8 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd2Q99JR8 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Smarcd2Q99JR8 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd2Q99JR8 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd2Q99JR8 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms