Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Thumpd1Q99J36 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Thumpd1Q99J36 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.83□□□□□ -0.35
Thumpd1Q99J36 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Thumpd1Q99J36 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Thumpd1Q99J36 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Thumpd1Q99J36 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Thumpd1Q99J36 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Thumpd1Q99J36 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Thumpd1Q99J36 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Thumpd1Q99J36 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Thumpd1Q99J36 Gm14859-201ENSMUST00000117752 357 ntBASIC12.83□□□□□ -0.36
Thumpd1Q99J36 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.83□□□□□ -0.36
Thumpd1Q99J36 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Thumpd1Q99J36 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Thumpd1Q99J36 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
Thumpd1Q99J36 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Thumpd1Q99J36 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Thumpd1Q99J36 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Thumpd1Q99J36 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.83□□□□□ -0.36
Thumpd1Q99J36 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Thumpd1Q99J36 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Thumpd1Q99J36 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.83□□□□□ -0.36
Thumpd1Q99J36 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Thumpd1Q99J36 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.83□□□□□ -0.36
Thumpd1Q99J36 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Thumpd1Q99J36 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Thumpd1Q99J36 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thumpd1Q99J36 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Thumpd1Q99J36 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thumpd1Q99J36 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thumpd1Q99J36 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thumpd1Q99J36 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Thumpd1Q99J36 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thumpd1Q99J36 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thumpd1Q99J36 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thumpd1Q99J36 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thumpd1Q99J36 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thumpd1Q99J36 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.82□□□□□ -0.36
Thumpd1Q99J36 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Thumpd1Q99J36 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thumpd1Q99J36 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.82□□□□□ -0.36
Thumpd1Q99J36 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Thumpd1Q99J36 Gm17807-201ENSMUST00000186869 298 ntBASIC12.82□□□□□ -0.36
Thumpd1Q99J36 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.82□□□□□ -0.36
Thumpd1Q99J36 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thumpd1Q99J36 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.82□□□□□ -0.36
Thumpd1Q99J36 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thumpd1Q99J36 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thumpd1Q99J36 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Thumpd1Q99J36 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Thumpd1Q99J36 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thumpd1Q99J36 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Thumpd1Q99J36 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thumpd1Q99J36 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thumpd1Q99J36 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Thumpd1Q99J36 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.82□□□□□ -0.36
Thumpd1Q99J36 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.82□□□□□ -0.36
Thumpd1Q99J36 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Thumpd1Q99J36 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.82□□□□□ -0.36
Thumpd1Q99J36 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Thumpd1Q99J36 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.82□□□□□ -0.36
Thumpd1Q99J36 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Thumpd1Q99J36 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms