Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sf3b3Q921M3 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sf3b3Q921M3 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sf3b3Q921M3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
Sf3b3Q921M3 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sf3b3Q921M3 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Sf3b3Q921M3 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Sf3b3Q921M3 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Sf3b3Q921M3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sf3b3Q921M3 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sf3b3Q921M3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sf3b3Q921M3 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC17.2■□□□□ 0.34
Sf3b3Q921M3 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Sf3b3Q921M3 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3b3Q921M3 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3b3Q921M3 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3b3Q921M3 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Sf3b3Q921M3 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3b3Q921M3 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Sf3b3Q921M3 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC17.19■□□□□ 0.34
Sf3b3Q921M3 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3b3Q921M3 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC17.19■□□□□ 0.34
Sf3b3Q921M3 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC17.19■□□□□ 0.34
Sf3b3Q921M3 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.19■□□□□ 0.34
Sf3b3Q921M3 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3b3Q921M3 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3b3Q921M3 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Sf3b3Q921M3 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3b3Q921M3 Gm5356-201ENSMUST00000093326 615 ntBASIC17.19■□□□□ 0.34
Sf3b3Q921M3 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3b3Q921M3 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3b3Q921M3 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3b3Q921M3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3b3Q921M3 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC17.19■□□□□ 0.34
Sf3b3Q921M3 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3b3Q921M3 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Sf3b3Q921M3 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3b3Q921M3 AC114543.1-201ENSMUST00000226451 1558 ntBASIC17.19■□□□□ 0.34
Sf3b3Q921M3 AC114008.2-201ENSMUST00000227699 1347 ntBASIC17.19■□□□□ 0.34
Sf3b3Q921M3 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3b3Q921M3 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3b3Q921M3 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3b3Q921M3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Sf3b3Q921M3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3b3Q921M3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3b3Q921M3 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
Sf3b3Q921M3 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3b3Q921M3 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3b3Q921M3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3b3Q921M3 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3b3Q921M3 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3b3Q921M3 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3b3Q921M3 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
Sf3b3Q921M3 Gm11524-201ENSMUST00000119349 807 ntBASIC17.18■□□□□ 0.34
Sf3b3Q921M3 Mir1894-201ENSMUST00000122802 81 ntBASIC17.18■□□□□ 0.34
Sf3b3Q921M3 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3b3Q921M3 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3b3Q921M3 Gm8463-201ENSMUST00000208573 613 ntBASIC17.18■□□□□ 0.34
Sf3b3Q921M3 AC192088.1-201ENSMUST00000227561 301 ntBASIC17.18■□□□□ 0.34
Sf3b3Q921M3 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3b3Q921M3 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3b3Q921M3 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Sf3b3Q921M3 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3b3Q921M3 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3b3Q921M3 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3b3Q921M3 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC17.18■□□□□ 0.34
Sf3b3Q921M3 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3b3Q921M3 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3b3Q921M3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.17■□□□□ 0.34
Sf3b3Q921M3 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sf3b3Q921M3 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sf3b3Q921M3 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sf3b3Q921M3 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sf3b3Q921M3 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.17■□□□□ 0.34
Sf3b3Q921M3 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sf3b3Q921M3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sf3b3Q921M3 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sf3b3Q921M3 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sf3b3Q921M3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sf3b3Q921M3 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sf3b3Q921M3 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sf3b3Q921M3 Gm11557-201ENSMUST00000120200 1008 ntBASIC17.17■□□□□ 0.34
Sf3b3Q921M3 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC17.17■□□□□ 0.34
Sf3b3Q921M3 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sf3b3Q921M3 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC17.17■□□□□ 0.34
Sf3b3Q921M3 Gm8927-201ENSMUST00000181978 981 ntBASIC17.17■□□□□ 0.34
Sf3b3Q921M3 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC17.17■□□□□ 0.34
Sf3b3Q921M3 Ighv1-51-201ENSMUST00000192903 354 ntBASIC17.17■□□□□ 0.34
Sf3b3Q921M3 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC17.17■□□□□ 0.34
Sf3b3Q921M3 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sf3b3Q921M3 Gm3222-201ENSMUST00000071282 990 ntBASIC17.17■□□□□ 0.34
Sf3b3Q921M3 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sf3b3Q921M3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.17■□□□□ 0.34
Sf3b3Q921M3 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sf3b3Q921M3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sf3b3Q921M3 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Sf3b3Q921M3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sf3b3Q921M3 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sf3b3Q921M3 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sf3b3Q921M3 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms