Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC16.78■□□□□ 0.28
StrcQ8VIM6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
StrcQ8VIM6 Gm15544-201ENSMUST00000118776 1531 ntBASIC16.78■□□□□ 0.28
StrcQ8VIM6 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC16.77■□□□□ 0.28
StrcQ8VIM6 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC16.77■□□□□ 0.28
StrcQ8VIM6 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.77■□□□□ 0.28
StrcQ8VIM6 Gm2445-201ENSMUST00000182798 989 ntBASIC16.77■□□□□ 0.28
StrcQ8VIM6 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC16.77■□□□□ 0.28
StrcQ8VIM6 Gm24447-201ENSMUST00000083977 338 ntBASIC16.77■□□□□ 0.28
StrcQ8VIM6 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
StrcQ8VIM6 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.77■□□□□ 0.28
StrcQ8VIM6 AC153366.2-201ENSMUST00000219461 1984 ntBASIC16.77■□□□□ 0.28
StrcQ8VIM6 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
StrcQ8VIM6 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
StrcQ8VIM6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
StrcQ8VIM6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
StrcQ8VIM6 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
StrcQ8VIM6 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
StrcQ8VIM6 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
StrcQ8VIM6 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
StrcQ8VIM6 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
StrcQ8VIM6 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
StrcQ8VIM6 Gm6082-201ENSMUST00000215204 454 ntBASIC16.77■□□□□ 0.27
StrcQ8VIM6 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
StrcQ8VIM6 Gm10268-201ENSMUST00000085340 555 ntBASIC16.77■□□□□ 0.27
StrcQ8VIM6 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
StrcQ8VIM6 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
StrcQ8VIM6 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
StrcQ8VIM6 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
StrcQ8VIM6 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
StrcQ8VIM6 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.27
StrcQ8VIM6 AC113441.2-201ENSMUST00000221538 1468 ntBASIC16.76■□□□□ 0.27
StrcQ8VIM6 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
StrcQ8VIM6 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.76■□□□□ 0.27
StrcQ8VIM6 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
StrcQ8VIM6 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
StrcQ8VIM6 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
StrcQ8VIM6 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
StrcQ8VIM6 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC16.76■□□□□ 0.27
StrcQ8VIM6 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC16.76■□□□□ 0.27
StrcQ8VIM6 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.76■□□□□ 0.27
StrcQ8VIM6 Gm18753-201ENSMUST00000201000 566 ntBASIC16.76■□□□□ 0.27
StrcQ8VIM6 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC16.76■□□□□ 0.27
StrcQ8VIM6 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC16.76■□□□□ 0.27
StrcQ8VIM6 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
StrcQ8VIM6 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC16.76■□□□□ 0.27
StrcQ8VIM6 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC16.76■□□□□ 0.27
StrcQ8VIM6 Gm18630-201ENSMUST00000222109 1397 ntBASIC16.76■□□□□ 0.27
StrcQ8VIM6 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
StrcQ8VIM6 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
StrcQ8VIM6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
StrcQ8VIM6 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
StrcQ8VIM6 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
StrcQ8VIM6 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
StrcQ8VIM6 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
StrcQ8VIM6 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
StrcQ8VIM6 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
StrcQ8VIM6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
StrcQ8VIM6 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
StrcQ8VIM6 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
StrcQ8VIM6 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
StrcQ8VIM6 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
StrcQ8VIM6 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
StrcQ8VIM6 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC16.75■□□□□ 0.27
StrcQ8VIM6 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC16.75■□□□□ 0.27
StrcQ8VIM6 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC16.75■□□□□ 0.27
StrcQ8VIM6 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC16.75■□□□□ 0.27
StrcQ8VIM6 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC16.75■□□□□ 0.27
StrcQ8VIM6 Gm2824-203ENSMUST00000226189 1228 ntBASIC16.75■□□□□ 0.27
StrcQ8VIM6 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.75■□□□□ 0.27
StrcQ8VIM6 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
StrcQ8VIM6 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC16.75■□□□□ 0.27
StrcQ8VIM6 Gm9755-201ENSMUST00000032981 1356 ntBASIC16.75■□□□□ 0.27
StrcQ8VIM6 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
StrcQ8VIM6 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
StrcQ8VIM6 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC16.75■□□□□ 0.27
StrcQ8VIM6 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.75■□□□□ 0.27
StrcQ8VIM6 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
StrcQ8VIM6 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
StrcQ8VIM6 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC16.75■□□□□ 0.27
StrcQ8VIM6 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
StrcQ8VIM6 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
StrcQ8VIM6 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
StrcQ8VIM6 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
StrcQ8VIM6 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
StrcQ8VIM6 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC16.75■□□□□ 0.27
StrcQ8VIM6 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.75■□□□□ 0.27
StrcQ8VIM6 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
StrcQ8VIM6 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
StrcQ8VIM6 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC16.75■□□□□ 0.27
StrcQ8VIM6 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
StrcQ8VIM6 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
StrcQ8VIM6 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
StrcQ8VIM6 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.74■□□□□ 0.27
StrcQ8VIM6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
StrcQ8VIM6 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
StrcQ8VIM6 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
StrcQ8VIM6 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
StrcQ8VIM6 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
StrcQ8VIM6 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms