Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Gm4691-201ENSMUST00000182339 1000 ntBASIC11.75□□□□□ -0.53
Nup35Q8R4R6 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Gm2451-201ENSMUST00000199447 999 ntBASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Gm10290-201ENSMUST00000200451 999 ntBASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup35Q8R4R6 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Gm7222-201ENSMUST00000117512 906 ntBASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Gm11764-201ENSMUST00000120221 623 ntBASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms