Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp44Q8C2S0 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.84■□□□□ 0.29
Usp44Q8C2S0 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.84■□□□□ 0.29
Usp44Q8C2S0 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Usp44Q8C2S0 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.84■□□□□ 0.29
Usp44Q8C2S0 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.84■□□□□ 0.29
Usp44Q8C2S0 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.84■□□□□ 0.29
Usp44Q8C2S0 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp44Q8C2S0 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp44Q8C2S0 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Usp44Q8C2S0 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp44Q8C2S0 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp44Q8C2S0 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp44Q8C2S0 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.84■□□□□ 0.29
Usp44Q8C2S0 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp44Q8C2S0 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp44Q8C2S0 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Usp44Q8C2S0 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.84■□□□□ 0.29
Usp44Q8C2S0 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Usp44Q8C2S0 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Usp44Q8C2S0 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Usp44Q8C2S0 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Usp44Q8C2S0 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.83■□□□□ 0.28
Usp44Q8C2S0 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp44Q8C2S0 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.83■□□□□ 0.28
Usp44Q8C2S0 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp44Q8C2S0 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Usp44Q8C2S0 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp44Q8C2S0 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Usp44Q8C2S0 Gm27622-201ENSMUST00000183779 60 ntBASIC16.83■□□□□ 0.28
Usp44Q8C2S0 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp44Q8C2S0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp44Q8C2S0 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.83■□□□□ 0.28
Usp44Q8C2S0 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp44Q8C2S0 Dupd1-202ENSMUST00000224735 548 ntBASIC16.83■□□□□ 0.28
Usp44Q8C2S0 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.83■□□□□ 0.28
Usp44Q8C2S0 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp44Q8C2S0 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Usp44Q8C2S0 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp44Q8C2S0 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp44Q8C2S0 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp44Q8C2S0 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Usp44Q8C2S0 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp44Q8C2S0 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Usp44Q8C2S0 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp44Q8C2S0 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Usp44Q8C2S0 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp44Q8C2S0 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Usp44Q8C2S0 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp44Q8C2S0 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp44Q8C2S0 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp44Q8C2S0 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Gm27618-201ENSMUST00000183671 60 ntBASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Gm27533-201ENSMUST00000183800 152 ntBASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Gm44608-201ENSMUST00000206827 855 ntBASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.82■□□□□ 0.28
Usp44Q8C2S0 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Mir125a-201ENSMUST00000083545 68 ntBASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp44Q8C2S0 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp44Q8C2S0 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp44Q8C2S0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Usp44Q8C2S0 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp44Q8C2S0 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp44Q8C2S0 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp44Q8C2S0 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp44Q8C2S0 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp44Q8C2S0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp44Q8C2S0 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp44Q8C2S0 Gm24543-201ENSMUST00000103867 82 ntBASIC16.81■□□□□ 0.28
Usp44Q8C2S0 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Usp44Q8C2S0 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp44Q8C2S0 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp44Q8C2S0 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms