Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.08□□□□□ -0.48
Smim4Q8C1Q6 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.08□□□□□ -0.48
Smim4Q8C1Q6 Gm2451-201ENSMUST00000199447 999 ntBASIC12.08□□□□□ -0.48
Smim4Q8C1Q6 Gm10290-201ENSMUST00000200451 999 ntBASIC12.08□□□□□ -0.48
Smim4Q8C1Q6 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim4Q8C1Q6 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim4Q8C1Q6 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.08□□□□□ -0.48
Smim4Q8C1Q6 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim4Q8C1Q6 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim4Q8C1Q6 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim4Q8C1Q6 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smim4Q8C1Q6 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim4Q8C1Q6 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim4Q8C1Q6 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smim4Q8C1Q6 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim4Q8C1Q6 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim4Q8C1Q6 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim4Q8C1Q6 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim4Q8C1Q6 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim4Q8C1Q6 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.08□□□□□ -0.48
Smim4Q8C1Q6 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Smim4Q8C1Q6 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.08□□□□□ -0.48
Smim4Q8C1Q6 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smim4Q8C1Q6 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smim4Q8C1Q6 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smim4Q8C1Q6 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim4Q8C1Q6 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.08□□□□□ -0.48
Smim4Q8C1Q6 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Olfr286-202ENSMUST00000205305 969 ntBASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim4Q8C1Q6 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.06□□□□□ -0.48
Smim4Q8C1Q6 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Smim4Q8C1Q6 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smim4Q8C1Q6 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smim4Q8C1Q6 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smim4Q8C1Q6 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smim4Q8C1Q6 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Smim4Q8C1Q6 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smim4Q8C1Q6 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smim4Q8C1Q6 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Smim4Q8C1Q6 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smim4Q8C1Q6 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smim4Q8C1Q6 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smim4Q8C1Q6 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Smim4Q8C1Q6 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Smim4Q8C1Q6 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smim4Q8C1Q6 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Smim4Q8C1Q6 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smim4Q8C1Q6 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smim4Q8C1Q6 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.06□□□□□ -0.48
Smim4Q8C1Q6 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smim4Q8C1Q6 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.06□□□□□ -0.48
Smim4Q8C1Q6 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smim4Q8C1Q6 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smim4Q8C1Q6 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smim4Q8C1Q6 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Smim4Q8C1Q6 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smim4Q8C1Q6 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms