Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.58□□□□□ -0.08
Sh3rf2Q8BZT2 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Sh3rf2Q8BZT2 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.58□□□□□ -0.08
Sh3rf2Q8BZT2 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf2Q8BZT2 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.58□□□□□ -0.08
Sh3rf2Q8BZT2 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Sh3rf2Q8BZT2 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf2Q8BZT2 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf2Q8BZT2 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf2Q8BZT2 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf2Q8BZT2 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.58□□□□□ -0.08
Sh3rf2Q8BZT2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf2Q8BZT2 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf2Q8BZT2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf2Q8BZT2 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf2Q8BZT2 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Sh3rf2Q8BZT2 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf2Q8BZT2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf2Q8BZT2 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf2Q8BZT2 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Sh3rf2Q8BZT2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Sh3rf2Q8BZT2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf2Q8BZT2 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Sh3rf2Q8BZT2 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf2Q8BZT2 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf2Q8BZT2 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf2Q8BZT2 Gm12859-201ENSMUST00000117834 427 ntBASIC14.57□□□□□ -0.08
Sh3rf2Q8BZT2 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.57□□□□□ -0.08
Sh3rf2Q8BZT2 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.57□□□□□ -0.08
Sh3rf2Q8BZT2 Gm33320-201ENSMUST00000192232 530 ntBASIC14.57□□□□□ -0.08
Sh3rf2Q8BZT2 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf2Q8BZT2 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.57□□□□□ -0.08
Sh3rf2Q8BZT2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf2Q8BZT2 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf2Q8BZT2 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Sh3rf2Q8BZT2 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf2Q8BZT2 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Sh3rf2Q8BZT2 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.57□□□□□ -0.08
Sh3rf2Q8BZT2 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf2Q8BZT2 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh3rf2Q8BZT2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 Efs-202ENSMUST00000227037 2540 ntBASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 Gm14042-201ENSMUST00000120139 833 ntBASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh3rf2Q8BZT2 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Sh3rf2Q8BZT2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Sh3rf2Q8BZT2 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Sh3rf2Q8BZT2 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3rf2Q8BZT2 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Sh3rf2Q8BZT2 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3rf2Q8BZT2 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.55□□□□□ -0.08
Sh3rf2Q8BZT2 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.55□□□□□ -0.08
Sh3rf2Q8BZT2 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.55□□□□□ -0.08
Sh3rf2Q8BZT2 Gm42612-201ENSMUST00000197986 623 ntBASIC14.55□□□□□ -0.08
Sh3rf2Q8BZT2 Gm43170-201ENSMUST00000199827 612 ntBASIC14.55□□□□□ -0.08
Sh3rf2Q8BZT2 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3rf2Q8BZT2 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.55□□□□□ -0.08
Sh3rf2Q8BZT2 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3rf2Q8BZT2 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3rf2Q8BZT2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3rf2Q8BZT2 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3rf2Q8BZT2 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3rf2Q8BZT2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3rf2Q8BZT2 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3rf2Q8BZT2 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3rf2Q8BZT2 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.55□□□□□ -0.08
Sh3rf2Q8BZT2 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3rf2Q8BZT2 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3rf2Q8BZT2 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3rf2Q8BZT2 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms