Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Gm12134-201ENSMUST00000122109 520 ntBASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Mir125a-201ENSMUST00000083545 68 ntBASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup54Q8BTS4 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup54Q8BTS4 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup54Q8BTS4 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup54Q8BTS4 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nup54Q8BTS4 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Nup54Q8BTS4 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup54Q8BTS4 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup54Q8BTS4 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Nup54Q8BTS4 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.72□□□□□ -0.05
Nup54Q8BTS4 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup54Q8BTS4 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup54Q8BTS4 Gm25925-201ENSMUST00000158314 306 ntBASIC14.72□□□□□ -0.05
Nup54Q8BTS4 Gm27306-201ENSMUST00000183970 107 ntBASIC14.72□□□□□ -0.05
Nup54Q8BTS4 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.72□□□□□ -0.05
Nup54Q8BTS4 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup54Q8BTS4 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup54Q8BTS4 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.72□□□□□ -0.05
Nup54Q8BTS4 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup54Q8BTS4 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup54Q8BTS4 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.72□□□□□ -0.05
Nup54Q8BTS4 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup54Q8BTS4 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup54Q8BTS4 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nup54Q8BTS4 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup54Q8BTS4 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.72□□□□□ -0.05
Nup54Q8BTS4 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup54Q8BTS4 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nup54Q8BTS4 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup54Q8BTS4 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup54Q8BTS4 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup54Q8BTS4 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Nup54Q8BTS4 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup54Q8BTS4 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Nup54Q8BTS4 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Nup54Q8BTS4 Gm15653-201ENSMUST00000119247 907 ntBASIC14.71□□□□□ -0.05
Nup54Q8BTS4 Gm14767-201ENSMUST00000121559 586 ntBASIC14.71□□□□□ -0.05
Nup54Q8BTS4 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Nup54Q8BTS4 Gm27680-201ENSMUST00000184192 160 ntBASIC14.71□□□□□ -0.05
Nup54Q8BTS4 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.71□□□□□ -0.05
Nup54Q8BTS4 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Nup54Q8BTS4 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup54Q8BTS4 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup54Q8BTS4 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Nup54Q8BTS4 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Nup54Q8BTS4 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup54Q8BTS4 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
Nup54Q8BTS4 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup54Q8BTS4 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup54Q8BTS4 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Nup54Q8BTS4 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup54Q8BTS4 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Nup54Q8BTS4 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nup54Q8BTS4 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Nup54Q8BTS4 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup54Q8BTS4 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup54Q8BTS4 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup54Q8BTS4 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup54Q8BTS4 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nup54Q8BTS4 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Nup54Q8BTS4 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup54Q8BTS4 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup54Q8BTS4 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nup54Q8BTS4 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup54Q8BTS4 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Nup54Q8BTS4 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Nup54Q8BTS4 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup54Q8BTS4 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup54Q8BTS4 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nup54Q8BTS4 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nup54Q8BTS4 Mir7023-201ENSMUST00000185093 64 ntBASIC14.7□□□□□ -0.06
Nup54Q8BTS4 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nup54Q8BTS4 Gm44344-201ENSMUST00000200287 129 ntBASIC14.7□□□□□ -0.06
Nup54Q8BTS4 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms