Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Samm50Q8BGH2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.89■□□□□ 0.3
Samm50Q8BGH2 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Samm50Q8BGH2 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Samm50Q8BGH2 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Samm50Q8BGH2 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Samm50Q8BGH2 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Samm50Q8BGH2 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.89■□□□□ 0.29
Samm50Q8BGH2 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.89■□□□□ 0.29
Samm50Q8BGH2 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.89■□□□□ 0.29
Samm50Q8BGH2 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.89■□□□□ 0.29
Samm50Q8BGH2 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.89■□□□□ 0.29
Samm50Q8BGH2 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Samm50Q8BGH2 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.89■□□□□ 0.29
Samm50Q8BGH2 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Samm50Q8BGH2 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Samm50Q8BGH2 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Samm50Q8BGH2 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.89■□□□□ 0.29
Samm50Q8BGH2 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.89■□□□□ 0.29
Samm50Q8BGH2 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Samm50Q8BGH2 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Samm50Q8BGH2 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Samm50Q8BGH2 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Samm50Q8BGH2 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Samm50Q8BGH2 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Samm50Q8BGH2 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Samm50Q8BGH2 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Samm50Q8BGH2 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Samm50Q8BGH2 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.89■□□□□ 0.29
Samm50Q8BGH2 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Samm50Q8BGH2 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Samm50Q8BGH2 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Samm50Q8BGH2 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Samm50Q8BGH2 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Samm50Q8BGH2 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.88■□□□□ 0.29
Samm50Q8BGH2 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Samm50Q8BGH2 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Samm50Q8BGH2 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Samm50Q8BGH2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Samm50Q8BGH2 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Samm50Q8BGH2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Samm50Q8BGH2 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.88■□□□□ 0.29
Samm50Q8BGH2 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
Samm50Q8BGH2 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.88■□□□□ 0.29
Samm50Q8BGH2 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.88■□□□□ 0.29
Samm50Q8BGH2 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.88■□□□□ 0.29
Samm50Q8BGH2 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.88■□□□□ 0.29
Samm50Q8BGH2 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.88■□□□□ 0.29
Samm50Q8BGH2 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Samm50Q8BGH2 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.88■□□□□ 0.29
Samm50Q8BGH2 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Samm50Q8BGH2 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Samm50Q8BGH2 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Samm50Q8BGH2 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.88■□□□□ 0.29
Samm50Q8BGH2 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Samm50Q8BGH2 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.88■□□□□ 0.29
Samm50Q8BGH2 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Samm50Q8BGH2 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Samm50Q8BGH2 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Samm50Q8BGH2 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Samm50Q8BGH2 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Samm50Q8BGH2 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Samm50Q8BGH2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
Samm50Q8BGH2 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Samm50Q8BGH2 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Samm50Q8BGH2 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
Samm50Q8BGH2 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.87■□□□□ 0.29
Samm50Q8BGH2 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Samm50Q8BGH2 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Samm50Q8BGH2 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Samm50Q8BGH2 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Samm50Q8BGH2 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Samm50Q8BGH2 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.87■□□□□ 0.29
Samm50Q8BGH2 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Samm50Q8BGH2 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Samm50Q8BGH2 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Samm50Q8BGH2 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Samm50Q8BGH2 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Samm50Q8BGH2 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Samm50Q8BGH2 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Samm50Q8BGH2 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Samm50Q8BGH2 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Samm50Q8BGH2 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Samm50Q8BGH2 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Samm50Q8BGH2 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Samm50Q8BGH2 Gm9385-201ENSMUST00000117563 472 ntBASIC16.87■□□□□ 0.29
Samm50Q8BGH2 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.87■□□□□ 0.29
Samm50Q8BGH2 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Samm50Q8BGH2 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Samm50Q8BGH2 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Samm50Q8BGH2 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.87■□□□□ 0.29
Samm50Q8BGH2 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Samm50Q8BGH2 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.87■□□□□ 0.29
Samm50Q8BGH2 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.87■□□□□ 0.29
Samm50Q8BGH2 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.87■□□□□ 0.29
Samm50Q8BGH2 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Samm50Q8BGH2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Samm50Q8BGH2 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Samm50Q8BGH2 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Samm50Q8BGH2 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms