Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc116Q80X53 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc116Q80X53 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc116Q80X53 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc116Q80X53 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc116Q80X53 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Ccdc116Q80X53 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccdc116Q80X53 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc116Q80X53 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc116Q80X53 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc116Q80X53 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc116Q80X53 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc116Q80X53 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccdc116Q80X53 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc116Q80X53 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc116Q80X53 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc116Q80X53 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc116Q80X53 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.1□□□□□ -0.15
Ccdc116Q80X53 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.1□□□□□ -0.15
Ccdc116Q80X53 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccdc116Q80X53 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.1□□□□□ -0.15
Ccdc116Q80X53 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc116Q80X53 Gm44771-201ENSMUST00000206975 626 ntBASIC14.1□□□□□ -0.15
Ccdc116Q80X53 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.1□□□□□ -0.15
Ccdc116Q80X53 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.1□□□□□ -0.15
Ccdc116Q80X53 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc116Q80X53 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc116Q80X53 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc116Q80X53 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc116Q80X53 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc116Q80X53 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc116Q80X53 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc116Q80X53 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc116Q80X53 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc116Q80X53 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc116Q80X53 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc116Q80X53 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc116Q80X53 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc116Q80X53 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc116Q80X53 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc116Q80X53 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.09□□□□□ -0.15
Ccdc116Q80X53 Gm15467-201ENSMUST00000120582 445 ntBASIC14.09□□□□□ -0.15
Ccdc116Q80X53 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc116Q80X53 Gm25911-201ENSMUST00000157621 56 ntBASIC14.09□□□□□ -0.15
Ccdc116Q80X53 Gm37444-201ENSMUST00000193605 439 ntBASIC14.09□□□□□ -0.15
Ccdc116Q80X53 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.09□□□□□ -0.15
Ccdc116Q80X53 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.09□□□□□ -0.15
Ccdc116Q80X53 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.09□□□□□ -0.15
Ccdc116Q80X53 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc116Q80X53 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc116Q80X53 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc116Q80X53 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc116Q80X53 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc116Q80X53 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc116Q80X53 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc116Q80X53 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc116Q80X53 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc116Q80X53 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc116Q80X53 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc116Q80X53 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc116Q80X53 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc116Q80X53 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc116Q80X53 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc116Q80X53 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc116Q80X53 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.15
Ccdc116Q80X53 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc116Q80X53 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc116Q80X53 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc116Q80X53 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc116Q80X53 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.08□□□□□ -0.16
Ccdc116Q80X53 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc116Q80X53 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc116Q80X53 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.08□□□□□ -0.16
Ccdc116Q80X53 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc116Q80X53 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.08□□□□□ -0.16
Ccdc116Q80X53 Gm10275-202ENSMUST00000168697 495 ntBASIC14.08□□□□□ -0.16
Ccdc116Q80X53 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc116Q80X53 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.08□□□□□ -0.16
Ccdc116Q80X53 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc116Q80X53 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.08□□□□□ -0.16
Ccdc116Q80X53 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc116Q80X53 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ccdc116Q80X53 Gm10275-201ENSMUST00000092620 635 ntBASIC14.08□□□□□ -0.16
Ccdc116Q80X53 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc116Q80X53 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc116Q80X53 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc116Q80X53 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc116Q80X53 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc116Q80X53 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc116Q80X53 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc116Q80X53 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.08□□□□□ -0.16
Ccdc116Q80X53 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc116Q80X53 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.07□□□□□ -0.16
Ccdc116Q80X53 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc116Q80X53 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Ccdc116Q80X53 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc116Q80X53 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc116Q80X53 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc116Q80X53 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc116Q80X53 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms