Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ctdp1Q7TSG2 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ctdp1Q7TSG2 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ctdp1Q7TSG2 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ctdp1Q7TSG2 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.71■□□□□ 0.11
Ctdp1Q7TSG2 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Ctdp1Q7TSG2 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ctdp1Q7TSG2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.71■□□□□ 0.11
Ctdp1Q7TSG2 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ctdp1Q7TSG2 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Ctdp1Q7TSG2 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ctdp1Q7TSG2 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ctdp1Q7TSG2 Gm25925-201ENSMUST00000158314 306 ntBASIC15.71■□□□□ 0.11
Ctdp1Q7TSG2 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Ctdp1Q7TSG2 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.71■□□□□ 0.11
Ctdp1Q7TSG2 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.71■□□□□ 0.11
Ctdp1Q7TSG2 Gm37153-201ENSMUST00000193637 231 ntBASIC15.71■□□□□ 0.11
Ctdp1Q7TSG2 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ctdp1Q7TSG2 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ctdp1Q7TSG2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ctdp1Q7TSG2 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ctdp1Q7TSG2 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.71■□□□□ 0.11
Ctdp1Q7TSG2 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ctdp1Q7TSG2 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ctdp1Q7TSG2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ctdp1Q7TSG2 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ctdp1Q7TSG2 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ctdp1Q7TSG2 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ctdp1Q7TSG2 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.71■□□□□ 0.1
Ctdp1Q7TSG2 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ctdp1Q7TSG2 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ctdp1Q7TSG2 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ctdp1Q7TSG2 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ctdp1Q7TSG2 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ctdp1Q7TSG2 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.7■□□□□ 0.1
Ctdp1Q7TSG2 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ctdp1Q7TSG2 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ctdp1Q7TSG2 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ctdp1Q7TSG2 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ctdp1Q7TSG2 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ctdp1Q7TSG2 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ctdp1Q7TSG2 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.7■□□□□ 0.1
Ctdp1Q7TSG2 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.7■□□□□ 0.1
Ctdp1Q7TSG2 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ctdp1Q7TSG2 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ctdp1Q7TSG2 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.7■□□□□ 0.1
Ctdp1Q7TSG2 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.7■□□□□ 0.1
Ctdp1Q7TSG2 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ctdp1Q7TSG2 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.7■□□□□ 0.1
Ctdp1Q7TSG2 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.7■□□□□ 0.1
Ctdp1Q7TSG2 Psmb5-202ENSMUST00000227257 622 ntBASIC15.7■□□□□ 0.1
Ctdp1Q7TSG2 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ctdp1Q7TSG2 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ctdp1Q7TSG2 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ctdp1Q7TSG2 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ctdp1Q7TSG2 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ctdp1Q7TSG2 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ctdp1Q7TSG2 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ctdp1Q7TSG2 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.7■□□□□ 0.1
Ctdp1Q7TSG2 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ctdp1Q7TSG2 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ctdp1Q7TSG2 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ctdp1Q7TSG2 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ctdp1Q7TSG2 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ctdp1Q7TSG2 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ctdp1Q7TSG2 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ctdp1Q7TSG2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ctdp1Q7TSG2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ctdp1Q7TSG2 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Ctdp1Q7TSG2 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.69■□□□□ 0.1
Ctdp1Q7TSG2 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ctdp1Q7TSG2 Gm9682-201ENSMUST00000197505 556 ntBASIC15.69■□□□□ 0.1
Ctdp1Q7TSG2 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.69■□□□□ 0.1
Ctdp1Q7TSG2 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.69■□□□□ 0.1
Ctdp1Q7TSG2 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ctdp1Q7TSG2 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.69■□□□□ 0.1
Ctdp1Q7TSG2 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.69■□□□□ 0.1
Ctdp1Q7TSG2 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Ctdp1Q7TSG2 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ctdp1Q7TSG2 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Ctdp1Q7TSG2 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ctdp1Q7TSG2 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ctdp1Q7TSG2 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ctdp1Q7TSG2 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ctdp1Q7TSG2 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.68■□□□□ 0.1
Ctdp1Q7TSG2 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ctdp1Q7TSG2 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ctdp1Q7TSG2 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ctdp1Q7TSG2 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ctdp1Q7TSG2 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ctdp1Q7TSG2 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.68■□□□□ 0.1
Ctdp1Q7TSG2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Ctdp1Q7TSG2 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ctdp1Q7TSG2 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.68■□□□□ 0.1
Ctdp1Q7TSG2 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.68■□□□□ 0.1
Ctdp1Q7TSG2 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ctdp1Q7TSG2 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ctdp1Q7TSG2 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ctdp1Q7TSG2 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ctdp1Q7TSG2 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms