Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 AC161829.1-201ENSMUST00000220298 281 ntBASIC11.74□□□□□ -0.53
Vma21Q78T54 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vma21Q78T54 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vma21Q78T54 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vma21Q78T54 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vma21Q78T54 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC11.74□□□□□ -0.53
Vma21Q78T54 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Vma21Q78T54 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vma21Q78T54 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vma21Q78T54 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vma21Q78T54 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Vma21Q78T54 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vma21Q78T54 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Vma21Q78T54 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC11.74□□□□□ -0.53
Vma21Q78T54 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vma21Q78T54 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vma21Q78T54 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vma21Q78T54 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vma21Q78T54 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vma21Q78T54 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.74□□□□□ -0.53
Vma21Q78T54 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vma21Q78T54 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vma21Q78T54 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vma21Q78T54 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vma21Q78T54 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Vma21Q78T54 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vma21Q78T54 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Vma21Q78T54 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vma21Q78T54 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vma21Q78T54 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Vma21Q78T54 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vma21Q78T54 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.73□□□□□ -0.53
Vma21Q78T54 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vma21Q78T54 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC11.73□□□□□ -0.53
Vma21Q78T54 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vma21Q78T54 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC11.73□□□□□ -0.53
Vma21Q78T54 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vma21Q78T54 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.73□□□□□ -0.53
Vma21Q78T54 Gm8597-201ENSMUST00000191525 1109 ntBASIC11.73□□□□□ -0.53
Vma21Q78T54 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC11.73□□□□□ -0.53
Vma21Q78T54 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.73□□□□□ -0.53
Vma21Q78T54 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vma21Q78T54 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vma21Q78T54 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vma21Q78T54 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vma21Q78T54 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Vma21Q78T54 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vma21Q78T54 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vma21Q78T54 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vma21Q78T54 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vma21Q78T54 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vma21Q78T54 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vma21Q78T54 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Vma21Q78T54 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Vma21Q78T54 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vma21Q78T54 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Vma21Q78T54 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.72□□□□□ -0.53
Vma21Q78T54 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Vma21Q78T54 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.72□□□□□ -0.53
Vma21Q78T54 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Vma21Q78T54 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Gm13036-201ENSMUST00000117799 748 ntBASIC11.72□□□□□ -0.53
Vma21Q78T54 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Vma21Q78T54 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.72□□□□□ -0.53
Vma21Q78T54 Gm4691-201ENSMUST00000182339 1000 ntBASIC11.72□□□□□ -0.53
Vma21Q78T54 Gm2451-201ENSMUST00000199447 999 ntBASIC11.72□□□□□ -0.53
Vma21Q78T54 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Gm10290-201ENSMUST00000200451 999 ntBASIC11.72□□□□□ -0.53
Vma21Q78T54 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11.72□□□□□ -0.53
Vma21Q78T54 Gm9182-201ENSMUST00000217829 639 ntBASIC11.72□□□□□ -0.53
Vma21Q78T54 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC11.72□□□□□ -0.53
Vma21Q78T54 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Vma21Q78T54 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Vma21Q78T54 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms