Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgb4Q6P8W9 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.1■□□□□ 0.01
Hmgb4Q6P8W9 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgb4Q6P8W9 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.1■□□□□ 0.01
Hmgb4Q6P8W9 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.1■□□□□ 0.01
Hmgb4Q6P8W9 Gm23547-201ENSMUST00000158210 271 ntBASIC15.1■□□□□ 0.01
Hmgb4Q6P8W9 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Hmgb4Q6P8W9 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgb4Q6P8W9 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgb4Q6P8W9 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgb4Q6P8W9 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgb4Q6P8W9 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Hmgb4Q6P8W9 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.1■□□□□ 0.01
Hmgb4Q6P8W9 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Hmgb4Q6P8W9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.1■□□□□ 0.01
Hmgb4Q6P8W9 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgb4Q6P8W9 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgb4Q6P8W9 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgb4Q6P8W9 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.1■□□□□ 0.01
Hmgb4Q6P8W9 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.1■□□□□ 0.01
Hmgb4Q6P8W9 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.1■□□□□ 0.01
Hmgb4Q6P8W9 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgb4Q6P8W9 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgb4Q6P8W9 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Hmgb4Q6P8W9 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgb4Q6P8W9 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Hmgb4Q6P8W9 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Hmgb4Q6P8W9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.1■□□□□ 0.01
Hmgb4Q6P8W9 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgb4Q6P8W9 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Gm12134-201ENSMUST00000122109 520 ntBASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Gm25144-201ENSMUST00000179561 110 ntBASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Gm25352-201ENSMUST00000179815 110 ntBASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Gm5745-201ENSMUST00000183748 313 ntBASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb4Q6P8W9 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Hmgb4Q6P8W9 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hmgb4Q6P8W9 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Hmgb4Q6P8W9 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hmgb4Q6P8W9 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hmgb4Q6P8W9 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hmgb4Q6P8W9 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.08■□□□□ 0.01
Hmgb4Q6P8W9 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Hmgb4Q6P8W9 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.08■□□□□ 0
Hmgb4Q6P8W9 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgb4Q6P8W9 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgb4Q6P8W9 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgb4Q6P8W9 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.08■□□□□ 0
Hmgb4Q6P8W9 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.08■□□□□ 0
Hmgb4Q6P8W9 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgb4Q6P8W9 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgb4Q6P8W9 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Hmgb4Q6P8W9 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.08■□□□□ 0
Hmgb4Q6P8W9 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.08■□□□□ 0
Hmgb4Q6P8W9 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.08■□□□□ 0
Hmgb4Q6P8W9 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgb4Q6P8W9 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgb4Q6P8W9 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hmgb4Q6P8W9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgb4Q6P8W9 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgb4Q6P8W9 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.08■□□□□ 0
Hmgb4Q6P8W9 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.08■□□□□ 0
Hmgb4Q6P8W9 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Hmgb4Q6P8W9 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hmgb4Q6P8W9 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hmgb4Q6P8W9 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hmgb4Q6P8W9 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgb4Q6P8W9 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.08■□□□□ 0
Hmgb4Q6P8W9 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms