Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
Slx4Q6P1D7 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slx4Q6P1D7 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slx4Q6P1D7 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slx4Q6P1D7 Ssr1-204ENSMUST00000225319 1610 ntBASIC21.81■■□□□ 1.08
Slx4Q6P1D7 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slx4Q6P1D7 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slx4Q6P1D7 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Slx4Q6P1D7 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slx4Q6P1D7 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Slx4Q6P1D7 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Slx4Q6P1D7 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slx4Q6P1D7 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slx4Q6P1D7 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slx4Q6P1D7 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Slx4Q6P1D7 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Slx4Q6P1D7 Gm24420-201ENSMUST00000176676 59 ntBASIC21.81■■□□□ 1.08
Slx4Q6P1D7 Gm27501-201ENSMUST00000183599 107 ntBASIC21.81■■□□□ 1.08
Slx4Q6P1D7 Gm37259-201ENSMUST00000193903 849 ntBASIC21.81■■□□□ 1.08
Slx4Q6P1D7 Gm38223-201ENSMUST00000194484 695 ntBASIC21.81■■□□□ 1.08
Slx4Q6P1D7 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC21.81■■□□□ 1.08
Slx4Q6P1D7 Gm17823-201ENSMUST00000217830 1006 ntBASIC21.81■■□□□ 1.08
Slx4Q6P1D7 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slx4Q6P1D7 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slx4Q6P1D7 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slx4Q6P1D7 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
Slx4Q6P1D7 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slx4Q6P1D7 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slx4Q6P1D7 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC21.8■■□□□ 1.08
Slx4Q6P1D7 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slx4Q6P1D7 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slx4Q6P1D7 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC21.8■■□□□ 1.08
Slx4Q6P1D7 Gm10339-203ENSMUST00000225409 1671 ntBASIC21.8■■□□□ 1.08
Slx4Q6P1D7 Gm12203-201ENSMUST00000118235 598 ntBASIC21.8■■□□□ 1.08
Slx4Q6P1D7 Gm12209-201ENSMUST00000120089 596 ntBASIC21.8■■□□□ 1.08
Slx4Q6P1D7 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slx4Q6P1D7 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC21.8■■□□□ 1.08
Slx4Q6P1D7 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slx4Q6P1D7 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slx4Q6P1D7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slx4Q6P1D7 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Slx4Q6P1D7 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slx4Q6P1D7 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Slx4Q6P1D7 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slx4Q6P1D7 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Slx4Q6P1D7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slx4Q6P1D7 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Slx4Q6P1D7 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slx4Q6P1D7 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slx4Q6P1D7 Gm15371-201ENSMUST00000117057 784 ntBASIC21.79■■□□□ 1.08
Slx4Q6P1D7 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Slx4Q6P1D7 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC21.79■■□□□ 1.08
Slx4Q6P1D7 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slx4Q6P1D7 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
Slx4Q6P1D7 Gm45880-201ENSMUST00000213041 853 ntBASIC21.79■■□□□ 1.08
Slx4Q6P1D7 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slx4Q6P1D7 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slx4Q6P1D7 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slx4Q6P1D7 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slx4Q6P1D7 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Slx4Q6P1D7 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slx4Q6P1D7 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC21.78■■□□□ 1.08
Slx4Q6P1D7 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Slx4Q6P1D7 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC21.78■■□□□ 1.08
Slx4Q6P1D7 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slx4Q6P1D7 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slx4Q6P1D7 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC21.78■■□□□ 1.08
Slx4Q6P1D7 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Slx4Q6P1D7 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slx4Q6P1D7 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slx4Q6P1D7 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Slx4Q6P1D7 Gm11557-201ENSMUST00000120200 1008 ntBASIC21.78■■□□□ 1.08
Slx4Q6P1D7 Gm14730-201ENSMUST00000122378 1045 ntBASIC21.78■■□□□ 1.08
Slx4Q6P1D7 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC21.78■■□□□ 1.08
Slx4Q6P1D7 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Slx4Q6P1D7 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Slx4Q6P1D7 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Slx4Q6P1D7 Gm8927-201ENSMUST00000181978 981 ntBASIC21.78■■□□□ 1.08
Slx4Q6P1D7 Gm7498-201ENSMUST00000203282 1084 ntBASIC21.78■■□□□ 1.08
Slx4Q6P1D7 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slx4Q6P1D7 Gm3222-201ENSMUST00000071282 990 ntBASIC21.78■■□□□ 1.08
Slx4Q6P1D7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Slx4Q6P1D7 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slx4Q6P1D7 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Slx4Q6P1D7 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC21.77■■□□□ 1.08
Slx4Q6P1D7 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Slx4Q6P1D7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Slx4Q6P1D7 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Slx4Q6P1D7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Slx4Q6P1D7 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Slx4Q6P1D7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC21.77■■□□□ 1.08
Slx4Q6P1D7 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Slx4Q6P1D7 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Slx4Q6P1D7 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Slx4Q6P1D7 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Slx4Q6P1D7 Gm26083-201ENSMUST00000157904 193 ntBASIC21.77■■□□□ 1.08
Slx4Q6P1D7 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Slx4Q6P1D7 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC21.77■■□□□ 1.08
Slx4Q6P1D7 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC21.77■■□□□ 1.08
Slx4Q6P1D7 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms