Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VclQ64727 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VclQ64727 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VclQ64727 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VclQ64727 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VclQ64727 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VclQ64727 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
VclQ64727 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.15□□□□□ -0.14
VclQ64727 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
VclQ64727 Gm15693-201ENSMUST00000120470 637 ntBASIC14.15□□□□□ -0.14
VclQ64727 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.15□□□□□ -0.14
VclQ64727 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Gm37230-201ENSMUST00000194491 818 ntBASIC14.15□□□□□ -0.14
VclQ64727 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.15□□□□□ -0.14
VclQ64727 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
VclQ64727 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.15□□□□□ -0.14
VclQ64727 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VclQ64727 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
VclQ64727 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.15□□□□□ -0.15
VclQ64727 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
VclQ64727 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VclQ64727 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VclQ64727 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.14□□□□□ -0.15
VclQ64727 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VclQ64727 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
VclQ64727 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
VclQ64727 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VclQ64727 Gm13015-201ENSMUST00000118674 204 ntBASIC14.14□□□□□ -0.15
VclQ64727 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VclQ64727 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VclQ64727 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.14□□□□□ -0.15
VclQ64727 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
VclQ64727 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.14□□□□□ -0.15
VclQ64727 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
VclQ64727 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VclQ64727 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VclQ64727 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
VclQ64727 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VclQ64727 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VclQ64727 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
VclQ64727 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VclQ64727 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VclQ64727 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
VclQ64727 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
VclQ64727 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VclQ64727 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VclQ64727 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.14□□□□□ -0.15
VclQ64727 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
VclQ64727 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.14□□□□□ -0.15
VclQ64727 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VclQ64727 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VclQ64727 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VclQ64727 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VclQ64727 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VclQ64727 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.13□□□□□ -0.15
VclQ64727 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VclQ64727 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VclQ64727 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.13□□□□□ -0.15
VclQ64727 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VclQ64727 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VclQ64727 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VclQ64727 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VclQ64727 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.13□□□□□ -0.15
VclQ64727 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VclQ64727 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VclQ64727 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms