Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mre11Q61216 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mre11Q61216 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Mre11Q61216 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mre11Q61216 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Mre11Q61216 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mre11Q61216 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Mre11Q61216 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mre11Q61216 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mre11Q61216 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mre11Q61216 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Mre11Q61216 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mre11Q61216 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mre11Q61216 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mre11Q61216 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Mre11Q61216 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mre11Q61216 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.25■□□□□ 0.35
Mre11Q61216 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mre11Q61216 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mre11Q61216 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mre11Q61216 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mre11Q61216 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mre11Q61216 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Mre11Q61216 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mre11Q61216 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mre11Q61216 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mre11Q61216 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mre11Q61216 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Mre11Q61216 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mre11Q61216 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mre11Q61216 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mre11Q61216 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mre11Q61216 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mre11Q61216 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Mre11Q61216 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Mre11Q61216 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mre11Q61216 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Mre11Q61216 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Mre11Q61216 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mre11Q61216 Gm9013-201ENSMUST00000132939 882 ntBASIC17.24■□□□□ 0.35
Mre11Q61216 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Mre11Q61216 Gm25745-201ENSMUST00000174945 133 ntBASIC17.24■□□□□ 0.35
Mre11Q61216 Mir3081-201ENSMUST00000175305 84 ntBASIC17.24■□□□□ 0.35
Mre11Q61216 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.24■□□□□ 0.35
Mre11Q61216 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Mre11Q61216 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.24■□□□□ 0.35
Mre11Q61216 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.24■□□□□ 0.35
Mre11Q61216 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mre11Q61216 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mre11Q61216 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Mre11Q61216 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mre11Q61216 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mre11Q61216 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mre11Q61216 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mre11Q61216 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC17.24■□□□□ 0.35
Mre11Q61216 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mre11Q61216 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mre11Q61216 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Mre11Q61216 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mre11Q61216 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mre11Q61216 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Mre11Q61216 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Mre11Q61216 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mre11Q61216 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mre11Q61216 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mre11Q61216 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mre11Q61216 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Mre11Q61216 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Mre11Q61216 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mre11Q61216 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Mre11Q61216 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Mre11Q61216 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mre11Q61216 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mre11Q61216 AC238940.1-201ENSMUST00000225106 1858 ntBASIC17.23■□□□□ 0.35
Mre11Q61216 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mre11Q61216 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Mre11Q61216 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC17.23■□□□□ 0.35
Mre11Q61216 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Mre11Q61216 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Mre11Q61216 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Mre11Q61216 Gm23634-201ENSMUST00000175071 91 ntBASIC17.23■□□□□ 0.35
Mre11Q61216 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mre11Q61216 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mre11Q61216 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mre11Q61216 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
Mre11Q61216 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mre11Q61216 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Mre11Q61216 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Mre11Q61216 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mre11Q61216 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mre11Q61216 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Mre11Q61216 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mre11Q61216 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mre11Q61216 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mre11Q61216 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mre11Q61216 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.22■□□□□ 0.35
Mre11Q61216 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mre11Q61216 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Mre11Q61216 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mre11Q61216 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms