Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm7935-201ENSMUST00000100555 1278 ntBASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm13464-201ENSMUST00000119418 935 ntBASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm11780-201ENSMUST00000136880 516 ntBASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Rubie-203ENSMUST00000227803 2430 ntBASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm12644-201ENSMUST00000119935 606 ntBASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm13836-201ENSMUST00000121159 501 ntBASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm12895-201ENSMUST00000122214 226 ntBASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms