Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf38aQ4FK66 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf38aQ4FK66 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf38aQ4FK66 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf38aQ4FK66 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf38aQ4FK66 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf38aQ4FK66 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf38aQ4FK66 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38aQ4FK66 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38aQ4FK66 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.78■□□□□ 0.28
Prpf38aQ4FK66 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38aQ4FK66 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38aQ4FK66 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38aQ4FK66 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Prpf38aQ4FK66 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38aQ4FK66 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38aQ4FK66 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38aQ4FK66 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38aQ4FK66 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38aQ4FK66 Gm15957-201ENSMUST00000118893 974 ntBASIC16.78■□□□□ 0.28
Prpf38aQ4FK66 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Prpf38aQ4FK66 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38aQ4FK66 Gm9522-201ENSMUST00000182394 926 ntBASIC16.78■□□□□ 0.28
Prpf38aQ4FK66 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.78■□□□□ 0.28
Prpf38aQ4FK66 Gm6218-201ENSMUST00000219812 628 ntBASIC16.78■□□□□ 0.28
Prpf38aQ4FK66 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.78■□□□□ 0.28
Prpf38aQ4FK66 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Prpf38aQ4FK66 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38aQ4FK66 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38aQ4FK66 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Prpf38aQ4FK66 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38aQ4FK66 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38aQ4FK66 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38aQ4FK66 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38aQ4FK66 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38aQ4FK66 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Prpf38aQ4FK66 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38aQ4FK66 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38aQ4FK66 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf38aQ4FK66 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf38aQ4FK66 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.77■□□□□ 0.28
Prpf38aQ4FK66 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf38aQ4FK66 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf38aQ4FK66 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf38aQ4FK66 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.77■□□□□ 0.28
Prpf38aQ4FK66 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf38aQ4FK66 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf38aQ4FK66 Gm12585-201ENSMUST00000117307 290 ntBASIC16.77■□□□□ 0.28
Prpf38aQ4FK66 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.77■□□□□ 0.28
Prpf38aQ4FK66 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.77■□□□□ 0.28
Prpf38aQ4FK66 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf38aQ4FK66 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf38aQ4FK66 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf38aQ4FK66 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf38aQ4FK66 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf38aQ4FK66 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Prpf38aQ4FK66 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.77■□□□□ 0.28
Prpf38aQ4FK66 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf38aQ4FK66 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Prpf38aQ4FK66 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Prpf38aQ4FK66 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Prpf38aQ4FK66 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Prpf38aQ4FK66 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Prpf38aQ4FK66 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Prpf38aQ4FK66 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38aQ4FK66 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38aQ4FK66 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38aQ4FK66 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38aQ4FK66 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Prpf38aQ4FK66 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38aQ4FK66 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38aQ4FK66 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38aQ4FK66 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Prpf38aQ4FK66 Gm15460-201ENSMUST00000118147 391 ntBASIC16.76■□□□□ 0.27
Prpf38aQ4FK66 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.76■□□□□ 0.27
Prpf38aQ4FK66 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.76■□□□□ 0.27
Prpf38aQ4FK66 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.76■□□□□ 0.27
Prpf38aQ4FK66 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38aQ4FK66 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38aQ4FK66 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38aQ4FK66 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38aQ4FK66 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38aQ4FK66 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38aQ4FK66 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf38aQ4FK66 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Prpf38aQ4FK66 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf38aQ4FK66 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf38aQ4FK66 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf38aQ4FK66 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf38aQ4FK66 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf38aQ4FK66 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.75■□□□□ 0.27
Prpf38aQ4FK66 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf38aQ4FK66 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Prpf38aQ4FK66 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf38aQ4FK66 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Prpf38aQ4FK66 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf38aQ4FK66 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.75■□□□□ 0.27
Prpf38aQ4FK66 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.75■□□□□ 0.27
Prpf38aQ4FK66 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf38aQ4FK66 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms