Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Rnf44Q3UHJ8 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Rnf44Q3UHJ8 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
Rnf44Q3UHJ8 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 Gm13616-201ENSMUST00000120600 222 ntBASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf44Q3UHJ8 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf44Q3UHJ8 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf44Q3UHJ8 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf44Q3UHJ8 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.87□□□□□ -0.19
Rnf44Q3UHJ8 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf44Q3UHJ8 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.87□□□□□ -0.19
Rnf44Q3UHJ8 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.87□□□□□ -0.19
Rnf44Q3UHJ8 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf44Q3UHJ8 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Rnf44Q3UHJ8 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf44Q3UHJ8 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf44Q3UHJ8 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Rnf44Q3UHJ8 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf44Q3UHJ8 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf44Q3UHJ8 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf44Q3UHJ8 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Rnf44Q3UHJ8 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.87□□□□□ -0.19
Rnf44Q3UHJ8 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf44Q3UHJ8 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf44Q3UHJ8 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf44Q3UHJ8 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf44Q3UHJ8 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.87□□□□□ -0.19
Rnf44Q3UHJ8 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf44Q3UHJ8 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf44Q3UHJ8 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Rnf44Q3UHJ8 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf44Q3UHJ8 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.87□□□□□ -0.19
Rnf44Q3UHJ8 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf44Q3UHJ8 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Rnf44Q3UHJ8 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf44Q3UHJ8 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf44Q3UHJ8 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms