Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Hoxc4Q08624 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Hoxc4Q08624 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Hoxc4Q08624 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.79□□□□□ -0.2
Hoxc4Q08624 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc4Q08624 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Hoxc4Q08624 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc4Q08624 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Hoxc4Q08624 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc4Q08624 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc4Q08624 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc4Q08624 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.79□□□□□ -0.2
Hoxc4Q08624 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc4Q08624 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc4Q08624 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc4Q08624 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc4Q08624 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Gm37714-201ENSMUST00000194742 342 ntBASIC13.78□□□□□ -0.2
Hoxc4Q08624 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.78□□□□□ -0.2
Hoxc4Q08624 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.78□□□□□ -0.2
Hoxc4Q08624 Gm18027-201ENSMUST00000218947 619 ntBASIC13.78□□□□□ -0.2
Hoxc4Q08624 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc4Q08624 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.78□□□□□ -0.2
Hoxc4Q08624 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.78□□□□□ -0.2
Hoxc4Q08624 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc4Q08624 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hoxc4Q08624 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.77□□□□□ -0.2
Hoxc4Q08624 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hoxc4Q08624 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hoxc4Q08624 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hoxc4Q08624 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hoxc4Q08624 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Hoxc4Q08624 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.77□□□□□ -0.21
Hoxc4Q08624 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxc4Q08624 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxc4Q08624 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.77□□□□□ -0.21
Hoxc4Q08624 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxc4Q08624 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxc4Q08624 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.77□□□□□ -0.21
Hoxc4Q08624 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxc4Q08624 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxc4Q08624 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Hoxc4Q08624 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxc4Q08624 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.77□□□□□ -0.21
Hoxc4Q08624 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.77□□□□□ -0.21
Hoxc4Q08624 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxc4Q08624 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxc4Q08624 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.77□□□□□ -0.21
Hoxc4Q08624 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxc4Q08624 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxc4Q08624 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxc4Q08624 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxc4Q08624 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxc4Q08624 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxc4Q08624 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxc4Q08624 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.76□□□□□ -0.21
Hoxc4Q08624 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hoxc4Q08624 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms