Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Gm13612-201ENSMUST00000119276 390 ntBASIC10.38□□□□□ -0.75
Hspg2Q05793 Gm12997-201ENSMUST00000120207 640 ntBASIC10.38□□□□□ -0.75
Hspg2Q05793 B9d1os-201ENSMUST00000137010 674 ntBASIC10.38□□□□□ -0.75
Hspg2Q05793 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC10.38□□□□□ -0.75
Hspg2Q05793 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.38□□□□□ -0.75
Hspg2Q05793 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC10.38□□□□□ -0.75
Hspg2Q05793 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.38□□□□□ -0.75
Hspg2Q05793 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hspg2Q05793 Gm37812-201ENSMUST00000195216 2475 ntBASIC10.38□□□□□ -0.75
Hspg2Q05793 Gm21009-201ENSMUST00000197169 1669 ntBASIC10.38□□□□□ -0.75
Hspg2Q05793 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hspg2Q05793 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hspg2Q05793 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Hspg2Q05793 Gm27486-201ENSMUST00000184923 80 ntBASIC10.38□□□□□ -0.75
Hspg2Q05793 AU022133-201ENSMUST00000200601 873 ntBASIC10.38□□□□□ -0.75
Hspg2Q05793 Gm43947-201ENSMUST00000203019 959 ntBASIC10.38□□□□□ -0.75
Hspg2Q05793 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hspg2Q05793 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hspg2Q05793 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hspg2Q05793 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Hspg2Q05793 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hspg2Q05793 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hspg2Q05793 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hspg2Q05793 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hspg2Q05793 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hspg2Q05793 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.37□□□□□ -0.75
Hspg2Q05793 Gm4804-201ENSMUST00000182234 999 ntBASIC10.37□□□□□ -0.75
Hspg2Q05793 Gm37986-201ENSMUST00000193285 383 ntBASIC10.37□□□□□ -0.75
Hspg2Q05793 Gm44608-201ENSMUST00000206827 855 ntBASIC10.37□□□□□ -0.75
Hspg2Q05793 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hspg2Q05793 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hspg2Q05793 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Hspg2Q05793 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hspg2Q05793 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hspg2Q05793 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hspg2Q05793 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hspg2Q05793 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hspg2Q05793 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.37□□□□□ -0.75
Hspg2Q05793 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Hspg2Q05793 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC10.37□□□□□ -0.75
Hspg2Q05793 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.37□□□□□ -0.75
Hspg2Q05793 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.37□□□□□ -0.75
Hspg2Q05793 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.37□□□□□ -0.75
Hspg2Q05793 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Hspg2Q05793 Gm3222-201ENSMUST00000071282 990 ntBASIC10.37□□□□□ -0.75
Hspg2Q05793 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Hspg2Q05793 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hspg2Q05793 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hspg2Q05793 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hspg2Q05793 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC10.37□□□□□ -0.75
Hspg2Q05793 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC10.37□□□□□ -0.75
Hspg2Q05793 Gm45865-201ENSMUST00000211815 945 ntBASIC10.37□□□□□ -0.75
Hspg2Q05793 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hspg2Q05793 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Hspg2Q05793 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hspg2Q05793 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hspg2Q05793 Gm9252-201ENSMUST00000172364 1602 ntBASIC10.37□□□□□ -0.75
Hspg2Q05793 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hspg2Q05793 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hspg2Q05793 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC10.37□□□□□ -0.75
Hspg2Q05793 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hspg2Q05793 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hspg2Q05793 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hspg2Q05793 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.36□□□□□ -0.75
Hspg2Q05793 Gm12134-201ENSMUST00000122109 520 ntBASIC10.36□□□□□ -0.75
Hspg2Q05793 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Hspg2Q05793 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.36□□□□□ -0.75
Hspg2Q05793 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hspg2Q05793 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.36□□□□□ -0.75
Hspg2Q05793 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hspg2Q05793 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Hspg2Q05793 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hspg2Q05793 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hspg2Q05793 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hspg2Q05793 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Hspg2Q05793 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hspg2Q05793 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hspg2Q05793 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hspg2Q05793 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hspg2Q05793 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hspg2Q05793 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hspg2Q05793 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC10.36□□□□□ -0.75
Hspg2Q05793 Gm5523-201ENSMUST00000180415 997 ntBASIC10.36□□□□□ -0.75
Hspg2Q05793 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.36□□□□□ -0.75
Hspg2Q05793 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hspg2Q05793 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hspg2Q05793 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hspg2Q05793 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC10.36□□□□□ -0.75
Hspg2Q05793 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hspg2Q05793 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hspg2Q05793 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hspg2Q05793 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hspg2Q05793 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hspg2Q05793 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hspg2Q05793 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hspg2Q05793 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Hspg2Q05793 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hspg2Q05793 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hspg2Q05793 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hspg2Q05793 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms