Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm18615-201ENSMUST00000222919 1031 ntBASIC9.59□□□□□ -0.87
PrkdcP97313 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
PrkdcP97313 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
PrkdcP97313 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PrkdcP97313 AC123857.2-201ENSMUST00000225756 1582 ntBASIC9.59□□□□□ -0.87
PrkdcP97313 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PrkdcP97313 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PrkdcP97313 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
PrkdcP97313 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
PrkdcP97313 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PrkdcP97313 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PrkdcP97313 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
PrkdcP97313 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
PrkdcP97313 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
PrkdcP97313 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PrkdcP97313 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PrkdcP97313 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
PrkdcP97313 AC163637.1-201ENSMUST00000215491 1894 ntBASIC9.59□□□□□ -0.87
PrkdcP97313 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PrkdcP97313 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
PrkdcP97313 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC9.59□□□□□ -0.87
PrkdcP97313 Gm9726-201ENSMUST00000180321 678 ntBASIC9.59□□□□□ -0.87
PrkdcP97313 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
PrkdcP97313 Mir6958-201ENSMUST00000184207 73 ntBASIC9.59□□□□□ -0.87
PrkdcP97313 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC9.59□□□□□ -0.87
PrkdcP97313 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC9.59□□□□□ -0.87
PrkdcP97313 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PrkdcP97313 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
PrkdcP97313 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC9.58□□□□□ -0.88
PrkdcP97313 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC9.58□□□□□ -0.88
PrkdcP97313 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PrkdcP97313 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC9.58□□□□□ -0.88
PrkdcP97313 Gm18630-201ENSMUST00000222109 1397 ntBASIC9.58□□□□□ -0.88
PrkdcP97313 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PrkdcP97313 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PrkdcP97313 Gm11331-201ENSMUST00000119764 288 ntBASIC9.58□□□□□ -0.88
PrkdcP97313 Gm13316-201ENSMUST00000140537 691 ntBASIC9.58□□□□□ -0.88
PrkdcP97313 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PrkdcP97313 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
PrkdcP97313 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC9.58□□□□□ -0.88
PrkdcP97313 Gm2824-203ENSMUST00000226189 1228 ntBASIC9.58□□□□□ -0.88
PrkdcP97313 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
PrkdcP97313 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
PrkdcP97313 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
PrkdcP97313 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC9.58□□□□□ -0.88
PrkdcP97313 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PrkdcP97313 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC9.58□□□□□ -0.88
PrkdcP97313 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PrkdcP97313 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PrkdcP97313 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PrkdcP97313 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PrkdcP97313 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PrkdcP97313 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PrkdcP97313 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PrkdcP97313 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
PrkdcP97313 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PrkdcP97313 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PrkdcP97313 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PrkdcP97313 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PrkdcP97313 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PrkdcP97313 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PrkdcP97313 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PrkdcP97313 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC9.58□□□□□ -0.88
PrkdcP97313 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC9.58□□□□□ -0.88
PrkdcP97313 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PrkdcP97313 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PrkdcP97313 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
PrkdcP97313 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PrkdcP97313 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PrkdcP97313 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PrkdcP97313 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PrkdcP97313 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PrkdcP97313 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PrkdcP97313 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
PrkdcP97313 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
PrkdcP97313 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
PrkdcP97313 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
PrkdcP97313 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
PrkdcP97313 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PrkdcP97313 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
PrkdcP97313 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
PrkdcP97313 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC9.57□□□□□ -0.88
PrkdcP97313 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
PrkdcP97313 Gm44100-201ENSMUST00000204329 436 ntBASIC9.57□□□□□ -0.88
PrkdcP97313 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC9.57□□□□□ -0.88
PrkdcP97313 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PrkdcP97313 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
PrkdcP97313 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PrkdcP97313 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
PrkdcP97313 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
PrkdcP97313 Gm9252-201ENSMUST00000172364 1602 ntBASIC9.57□□□□□ -0.88
PrkdcP97313 Gm13886-201ENSMUST00000117876 1183 ntBASIC9.57□□□□□ -0.88
PrkdcP97313 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
PrkdcP97313 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PrkdcP97313 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
PrkdcP97313 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
PrkdcP97313 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
PrkdcP97313 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
PrkdcP97313 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
PrkdcP97313 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms