Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC18.11■□□□□ 0.49
Msh6P54276 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Msh6P54276 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Msh6P54276 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Msh6P54276 Gm44645-201ENSMUST00000205492 1653 ntBASIC18.11■□□□□ 0.49
Msh6P54276 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Msh6P54276 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Msh6P54276 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Msh6P54276 Gm4984-201ENSMUST00000115987 360 ntBASIC18.11■□□□□ 0.49
Msh6P54276 Gm5303-201ENSMUST00000117943 1252 ntBASIC18.11■□□□□ 0.49
Msh6P54276 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Msh6P54276 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC18.11■□□□□ 0.49
Msh6P54276 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC18.11■□□□□ 0.49
Msh6P54276 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Msh6P54276 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Msh6P54276 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Msh6P54276 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Msh6P54276 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Msh6P54276 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Msh6P54276 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Msh6P54276 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Msh6P54276 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Msh6P54276 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Msh6P54276 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Msh6P54276 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Msh6P54276 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Msh6P54276 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Msh6P54276 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Msh6P54276 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Msh6P54276 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Msh6P54276 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Msh6P54276 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Msh6P54276 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC18.1■□□□□ 0.49
Msh6P54276 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Msh6P54276 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC18.1■□□□□ 0.49
Msh6P54276 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC18.1■□□□□ 0.49
Msh6P54276 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC18.1■□□□□ 0.49
Msh6P54276 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Msh6P54276 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Msh6P54276 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Msh6P54276 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Msh6P54276 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Msh6P54276 AC166574.6-201ENSMUST00000227889 1806 ntBASIC18.1■□□□□ 0.49
Msh6P54276 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Msh6P54276 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Msh6P54276 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Msh6P54276 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Msh6P54276 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Msh6P54276 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC18.1■□□□□ 0.49
Msh6P54276 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Msh6P54276 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Msh6P54276 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Msh6P54276 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Msh6P54276 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Msh6P54276 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC18.09■□□□□ 0.49
Msh6P54276 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC18.09■□□□□ 0.49
Msh6P54276 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC18.09■□□□□ 0.49
Msh6P54276 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC18.09■□□□□ 0.49
Msh6P54276 Mir1982-201ENSMUST00000157368 74 ntBASIC18.09■□□□□ 0.49
Msh6P54276 Gm27892-201ENSMUST00000185017 106 ntBASIC18.09■□□□□ 0.49
Msh6P54276 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Msh6P54276 Ighv1-25-201ENSMUST00000195638 345 ntBASIC18.09■□□□□ 0.49
Msh6P54276 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Msh6P54276 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Msh6P54276 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Msh6P54276 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Msh6P54276 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Msh6P54276 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Msh6P54276 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Msh6P54276 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Msh6P54276 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Msh6P54276 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Msh6P54276 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Msh6P54276 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Msh6P54276 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Msh6P54276 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Msh6P54276 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Msh6P54276 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Msh6P54276 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Msh6P54276 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Msh6P54276 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Msh6P54276 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Msh6P54276 Gm12390-201ENSMUST00000117897 397 ntBASIC18.08■□□□□ 0.49
Msh6P54276 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Msh6P54276 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Msh6P54276 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC18.08■□□□□ 0.49
Msh6P54276 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Msh6P54276 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Msh6P54276 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Msh6P54276 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Msh6P54276 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Msh6P54276 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Msh6P54276 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Msh6P54276 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Msh6P54276 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Msh6P54276 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Msh6P54276 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Msh6P54276 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Msh6P54276 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Msh6P54276 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms