Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc3P49135 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Ercc3P49135 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc3P49135 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ercc3P49135 Gm13823-201ENSMUST00000119930 345 ntBASIC17.1■□□□□ 0.33
Ercc3P49135 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc3P49135 Gm22175-201ENSMUST00000175007 78 ntBASIC17.1■□□□□ 0.33
Ercc3P49135 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc3P49135 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ercc3P49135 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc3P49135 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc3P49135 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc3P49135 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc3P49135 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc3P49135 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc3P49135 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc3P49135 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.09■□□□□ 0.33
Ercc3P49135 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc3P49135 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc3P49135 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc3P49135 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc3P49135 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ercc3P49135 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc3P49135 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC17.09■□□□□ 0.33
Ercc3P49135 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.09■□□□□ 0.33
Ercc3P49135 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc3P49135 Gm6415-201ENSMUST00000118488 348 ntBASIC17.09■□□□□ 0.33
Ercc3P49135 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.09■□□□□ 0.33
Ercc3P49135 Gm9824-201ENSMUST00000178707 561 ntBASIC17.09■□□□□ 0.33
Ercc3P49135 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc3P49135 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.09■□□□□ 0.33
Ercc3P49135 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.09■□□□□ 0.33
Ercc3P49135 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ercc3P49135 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc3P49135 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc3P49135 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.09■□□□□ 0.33
Ercc3P49135 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc3P49135 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc3P49135 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc3P49135 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc3P49135 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc3P49135 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc3P49135 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc3P49135 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc3P49135 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ercc3P49135 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ercc3P49135 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ercc3P49135 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ercc3P49135 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ercc3P49135 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ercc3P49135 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ercc3P49135 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ercc3P49135 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.08■□□□□ 0.32
Ercc3P49135 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ercc3P49135 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Ercc3P49135 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ercc3P49135 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.08■□□□□ 0.32
Ercc3P49135 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.08■□□□□ 0.32
Ercc3P49135 Gm18737-201ENSMUST00000173594 937 ntBASIC17.08■□□□□ 0.32
Ercc3P49135 Mir6956-201ENSMUST00000183598 62 ntBASIC17.08■□□□□ 0.32
Ercc3P49135 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ercc3P49135 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ercc3P49135 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.08■□□□□ 0.32
Ercc3P49135 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.08■□□□□ 0.32
Ercc3P49135 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ercc3P49135 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ercc3P49135 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ercc3P49135 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ercc3P49135 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ercc3P49135 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ercc3P49135 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ercc3P49135 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ercc3P49135 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ercc3P49135 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ercc3P49135 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ercc3P49135 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ercc3P49135 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ercc3P49135 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ercc3P49135 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ercc3P49135 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ercc3P49135 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ercc3P49135 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ercc3P49135 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ercc3P49135 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.07■□□□□ 0.32
Ercc3P49135 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ercc3P49135 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ercc3P49135 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ercc3P49135 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ercc3P49135 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ercc3P49135 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.07■□□□□ 0.32
Ercc3P49135 Gm18049-201ENSMUST00000208909 581 ntBASIC17.07■□□□□ 0.32
Ercc3P49135 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ercc3P49135 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ercc3P49135 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ercc3P49135 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ercc3P49135 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ercc3P49135 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
Ercc3P49135 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ercc3P49135 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.07■□□□□ 0.32
Ercc3P49135 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms