Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GdnfP48540 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.63□□□□□ -0.39
GdnfP48540 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
GdnfP48540 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GdnfP48540 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GdnfP48540 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.63□□□□□ -0.39
GdnfP48540 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
GdnfP48540 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
GdnfP48540 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.63□□□□□ -0.39
GdnfP48540 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
GdnfP48540 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
GdnfP48540 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
GdnfP48540 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GdnfP48540 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
GdnfP48540 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GdnfP48540 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GdnfP48540 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GdnfP48540 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.63□□□□□ -0.39
GdnfP48540 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GdnfP48540 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
GdnfP48540 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
GdnfP48540 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GdnfP48540 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.62□□□□□ -0.39
GdnfP48540 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GdnfP48540 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GdnfP48540 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GdnfP48540 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GdnfP48540 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GdnfP48540 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GdnfP48540 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
GdnfP48540 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
GdnfP48540 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GdnfP48540 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GdnfP48540 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
GdnfP48540 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GdnfP48540 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GdnfP48540 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GdnfP48540 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.62□□□□□ -0.39
GdnfP48540 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.62□□□□□ -0.39
GdnfP48540 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.62□□□□□ -0.39
GdnfP48540 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.62□□□□□ -0.39
GdnfP48540 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
GdnfP48540 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.62□□□□□ -0.39
GdnfP48540 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.62□□□□□ -0.39
GdnfP48540 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
GdnfP48540 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GdnfP48540 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.62□□□□□ -0.39
GdnfP48540 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GdnfP48540 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
GdnfP48540 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
GdnfP48540 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GdnfP48540 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GdnfP48540 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GdnfP48540 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
GdnfP48540 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GdnfP48540 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GdnfP48540 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GdnfP48540 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
GdnfP48540 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
GdnfP48540 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GdnfP48540 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
GdnfP48540 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GdnfP48540 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GdnfP48540 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.61□□□□□ -0.39
GdnfP48540 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GdnfP48540 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
GdnfP48540 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.61□□□□□ -0.39
GdnfP48540 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.61□□□□□ -0.39
GdnfP48540 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GdnfP48540 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.61□□□□□ -0.39
GdnfP48540 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.61□□□□□ -0.39
GdnfP48540 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.61□□□□□ -0.39
GdnfP48540 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.61□□□□□ -0.39
GdnfP48540 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.61□□□□□ -0.39
GdnfP48540 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GdnfP48540 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.61□□□□□ -0.39
GdnfP48540 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GdnfP48540 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
GdnfP48540 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GdnfP48540 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
GdnfP48540 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
GdnfP48540 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.61□□□□□ -0.39
GdnfP48540 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GdnfP48540 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.61□□□□□ -0.39
GdnfP48540 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GdnfP48540 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GdnfP48540 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GdnfP48540 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GdnfP48540 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GdnfP48540 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GdnfP48540 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GdnfP48540 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GdnfP48540 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GdnfP48540 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GdnfP48540 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GdnfP48540 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.61□□□□□ -0.39
GdnfP48540 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
GdnfP48540 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.6□□□□□ -0.39
GdnfP48540 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
GdnfP48540 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms