Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.02□□□□□ -0.33
Rfx3P48381 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfx3P48381 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfx3P48381 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Rfx3P48381 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfx3P48381 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.02□□□□□ -0.33
Rfx3P48381 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rfx3P48381 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Rfx3P48381 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx3P48381 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx3P48381 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx3P48381 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx3P48381 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx3P48381 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.01□□□□□ -0.33
Rfx3P48381 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx3P48381 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.01□□□□□ -0.33
Rfx3P48381 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx3P48381 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Rfx3P48381 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx3P48381 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.01□□□□□ -0.33
Rfx3P48381 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rfx3P48381 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.01□□□□□ -0.33
Rfx3P48381 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.01□□□□□ -0.33
Rfx3P48381 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx3P48381 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx3P48381 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.01□□□□□ -0.33
Rfx3P48381 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.01□□□□□ -0.33
Rfx3P48381 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx3P48381 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Rfx3P48381 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx3P48381 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.01□□□□□ -0.33
Rfx3P48381 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx3P48381 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx3P48381 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx3P48381 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx3P48381 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Rfx3P48381 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Rfx3P48381 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx3P48381 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx3P48381 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx3P48381 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Rfx3P48381 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx3P48381 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx3P48381 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx3P48381 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx3P48381 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rfx3P48381 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx3P48381 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx3P48381 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx3P48381 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx3P48381 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rfx3P48381 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13□□□□□ -0.33
Rfx3P48381 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13□□□□□ -0.33
Rfx3P48381 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Rfx3P48381 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx3P48381 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13□□□□□ -0.33
Rfx3P48381 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13□□□□□ -0.33
Rfx3P48381 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13□□□□□ -0.33
Rfx3P48381 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13□□□□□ -0.33
Rfx3P48381 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13□□□□□ -0.33
Rfx3P48381 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx3P48381 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13□□□□□ -0.33
Rfx3P48381 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx3P48381 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx3P48381 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rfx3P48381 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx3P48381 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx3P48381 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx3P48381 Gm38197-201ENSMUST00000192320 2122 ntBASIC13□□□□□ -0.33
Rfx3P48381 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rfx3P48381 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx3P48381 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.99□□□□□ -0.33
Rfx3P48381 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx3P48381 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.99□□□□□ -0.33
Rfx3P48381 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx3P48381 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx3P48381 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rfx3P48381 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx3P48381 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.99□□□□□ -0.33
Rfx3P48381 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rfx3P48381 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx3P48381 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx3P48381 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Rfx3P48381 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx3P48381 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.99□□□□□ -0.33
Rfx3P48381 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.99□□□□□ -0.33
Rfx3P48381 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx3P48381 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rfx3P48381 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx3P48381 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx3P48381 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx3P48381 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx3P48381 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx3P48381 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx3P48381 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx3P48381 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfx3P48381 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.99□□□□□ -0.33
Rfx3P48381 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx3P48381 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx3P48381 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms