Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf4P43488 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf4P43488 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf4P43488 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf4P43488 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf4P43488 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.91□□□□□ -0.18
Tnfsf4P43488 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf4P43488 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf4P43488 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf4P43488 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.91□□□□□ -0.18
Tnfsf4P43488 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf4P43488 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf4P43488 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.91□□□□□ -0.18
Tnfsf4P43488 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf4P43488 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.91□□□□□ -0.18
Tnfsf4P43488 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf4P43488 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf4P43488 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.91□□□□□ -0.18
Tnfsf4P43488 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf4P43488 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf4P43488 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf4P43488 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf4P43488 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf4P43488 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf4P43488 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf4P43488 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf4P43488 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf4P43488 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Tnfsf4P43488 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf4P43488 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf4P43488 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf4P43488 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Tnfsf4P43488 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Tnfsf4P43488 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf4P43488 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf4P43488 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf4P43488 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf4P43488 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf4P43488 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf4P43488 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf4P43488 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf4P43488 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Tnfsf4P43488 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf4P43488 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf4P43488 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf4P43488 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf4P43488 Gm18195-201ENSMUST00000207604 706 ntBASIC13.9□□□□□ -0.18
Tnfsf4P43488 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf4P43488 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf4P43488 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf4P43488 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf4P43488 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf4P43488 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.9□□□□□ -0.18
Tnfsf4P43488 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.9□□□□□ -0.18
Tnfsf4P43488 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Tnfsf4P43488 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Tnfsf4P43488 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.9□□□□□ -0.18
Tnfsf4P43488 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf4P43488 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf4P43488 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf4P43488 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf4P43488 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf4P43488 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf4P43488 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf4P43488 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Tnfsf4P43488 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Tnfsf4P43488 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.9□□□□□ -0.19
Tnfsf4P43488 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.9□□□□□ -0.19
Tnfsf4P43488 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Tnfsf4P43488 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.89□□□□□ -0.19
Tnfsf4P43488 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf4P43488 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.89□□□□□ -0.19
Tnfsf4P43488 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf4P43488 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Tnfsf4P43488 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf4P43488 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf4P43488 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf4P43488 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf4P43488 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf4P43488 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf4P43488 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf4P43488 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf4P43488 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.89□□□□□ -0.19
Tnfsf4P43488 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Tnfsf4P43488 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.89□□□□□ -0.19
Tnfsf4P43488 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.89□□□□□ -0.19
Tnfsf4P43488 Thap2-203ENSMUST00000218989 527 ntBASIC13.89□□□□□ -0.19
Tnfsf4P43488 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf4P43488 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf4P43488 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf4P43488 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf4P43488 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.89□□□□□ -0.19
Tnfsf4P43488 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf4P43488 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf4P43488 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.89□□□□□ -0.19
Tnfsf4P43488 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf4P43488 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf4P43488 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf4P43488 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf4P43488 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms