Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chd1P40201 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Chd1P40201 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Chd1P40201 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chd1P40201 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chd1P40201 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Chd1P40201 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chd1P40201 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chd1P40201 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Chd1P40201 Gm4909-201ENSMUST00000118749 794 ntBASIC21.24■□□□□ 0.99
Chd1P40201 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Chd1P40201 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC21.24■□□□□ 0.99
Chd1P40201 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC21.24■□□□□ 0.99
Chd1P40201 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chd1P40201 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC21.23■□□□□ 0.99
Chd1P40201 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC21.23■□□□□ 0.99
Chd1P40201 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chd1P40201 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chd1P40201 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chd1P40201 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chd1P40201 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chd1P40201 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chd1P40201 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chd1P40201 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chd1P40201 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Chd1P40201 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Chd1P40201 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC21.23■□□□□ 0.99
Chd1P40201 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC21.23■□□□□ 0.99
Chd1P40201 AC121801.1-201ENSMUST00000225363 1899 ntBASIC21.23■□□□□ 0.99
Chd1P40201 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Chd1P40201 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chd1P40201 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Chd1P40201 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chd1P40201 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chd1P40201 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Chd1P40201 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chd1P40201 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chd1P40201 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
Chd1P40201 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chd1P40201 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC21.22■□□□□ 0.99
Chd1P40201 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Chd1P40201 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC21.22■□□□□ 0.99
Chd1P40201 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chd1P40201 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chd1P40201 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chd1P40201 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Chd1P40201 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chd1P40201 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chd1P40201 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chd1P40201 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chd1P40201 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Chd1P40201 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd1P40201 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Chd1P40201 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Chd1P40201 Gm30285-201ENSMUST00000214614 422 ntBASIC21.21■□□□□ 0.99
Chd1P40201 Morn2-202ENSMUST00000227729 656 ntBASIC21.21■□□□□ 0.99
Chd1P40201 AC022775.2-201ENSMUST00000227885 646 ntBASIC21.21■□□□□ 0.99
Chd1P40201 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd1P40201 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd1P40201 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd1P40201 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Chd1P40201 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Chd1P40201 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd1P40201 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd1P40201 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Chd1P40201 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Chd1P40201 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Chd1P40201 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Chd1P40201 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Chd1P40201 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd1P40201 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Chd1P40201 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd1P40201 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd1P40201 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Chd1P40201 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd1P40201 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd1P40201 Gm24548-201ENSMUST00000158650 108 ntBASIC21.21■□□□□ 0.99
Chd1P40201 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Chd1P40201 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC21.21■□□□□ 0.99
Chd1P40201 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC21.21■□□□□ 0.99
Chd1P40201 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd1P40201 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Chd1P40201 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Chd1P40201 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Chd1P40201 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Chd1P40201 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Chd1P40201 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Chd1P40201 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.99
Chd1P40201 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chd1P40201 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC21.2■□□□□ 0.98
Chd1P40201 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC21.2■□□□□ 0.98
Chd1P40201 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chd1P40201 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Chd1P40201 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chd1P40201 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Chd1P40201 Gm14208-201ENSMUST00000119645 678 ntBASIC21.2■□□□□ 0.98
Chd1P40201 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Chd1P40201 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC21.2■□□□□ 0.98
Chd1P40201 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Chd1P40201 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms